RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 FLVCR2Q9UPI3 526 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 LCE6AA0A183 80 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 K7EQG2 157 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 WRBO00258 174 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 IFNA21P01568 189 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 IL7P13232 177 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 C4orf46Q504U0 113 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 RNF125Q96EQ8 232 aa14.4□□□□□ -0.1
TPM4-208ENST00000588410 SDHCQ99643 169 aaPredicted RBP14.4□□□□□ -0.1
TPM4-208ENST00000588410 CA1P00915 261 aaPredicted RBP14.39□□□□□ -0.11
TPM4-208ENST00000588410 OR4E1P0C645 316 aa14.39□□□□□ -0.11
TPM4-208ENST00000588410 ZNF688P0C7X2 276 aa14.39□□□□□ -0.11
TPM4-208ENST00000588410 NUP62P37198 522 aaPredicted RBP14.39□□□□□ -0.11
TPM4-208ENST00000588410 TMEM217Q8N7C4 229 aa14.39□□□□□ -0.11
TPM4-208ENST00000588410 GATAD1Q8WUU5 269 aa14.39□□□□□ -0.11
TPM4-208ENST00000588410 GLMPQ8WWB7 406 aa14.39□□□□□ -0.11
TPM4-208ENST00000588410 ADAP1O75689 374 aa14.38□□□□□ -0.11
TPM4-208ENST00000588410 DCANP1Q8TF63 244 aa14.38□□□□□ -0.11
TPM4-208ENST00000588410 CXorf65A6NEN9 183 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 BUB3O43684 328 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 JTBO76095 146 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 ANXA7P20073 488 aaKnown RBP14.37□□□□□ -0.11
TPM4-208ENST00000588410 ZNF90Q03938 601 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 CNPY1Q3B7I2 92 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 SPANXN5Q5MJ07 72 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 OR8G2PQ6IF36 304 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 SIGLEC15Q6ZMC9 328 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 RARRES2Q99969 163 aa14.37□□□□□ -0.11
TPM4-208ENST00000588410 SNRPGP15A8MWD9 76 aa14.36□□□□□ -0.11
TPM4-208ENST00000588410 BTCP35070 178 aa14.36□□□□□ -0.11
TPM4-208ENST00000588410 LYZP61626 148 aa14.36□□□□□ -0.11
TPM4-208ENST00000588410 SNRPD3P62318 126 aaKnown RBP14.36□□□□□ -0.11
TPM4-208ENST00000588410 OR2F1Q13607 317 aa14.36□□□□□ -0.11
TPM4-208ENST00000588410 PMS2P11Q13670 270 aa14.36□□□□□ -0.11
TPM4-208ENST00000588410 NRN1Q9NPD7 142 aa14.36□□□□□ -0.11
TPM4-208ENST00000588410 STRAPQ9Y3F4 350 aaKnown RBP14.36□□□□□ -0.11
TPM4-208ENST00000588410 IGKV1D-37A0A075B6S9 117 aa14.35□□□□□ -0.11
TPM4-208ENST00000588410 KNCNA6PVL3 124 aa14.35□□□□□ -0.11
TPM4-208ENST00000588410 NKX2-1P43699 371 aaPredicted RBP14.35□□□□□ -0.11
TPM4-208ENST00000588410 PSMG4Q5JS54 123 aa14.35□□□□□ -0.11
TPM4-208ENST00000588410 PPP1R14BQ96C90 147 aa14.35□□□□□ -0.11
TPM4-208ENST00000588410 TRGV9Q99603 122 aa14.35□□□□□ -0.11
TPM4-208ENST00000588410 H3BP45 60 aa14.34□□□□□ -0.11
TPM4-208ENST00000588410 POLR2GP62487 172 aaKnown RBP eCLIP14.34□□□□□ -0.11
TPM4-208ENST00000588410 ID3Q02535 119 aa14.34□□□□□ -0.11
TPM4-208ENST00000588410 ACTL10Q5JWF8 245 aa14.34□□□□□ -0.11
TPM4-208ENST00000588410 MORN3Q6PF18 240 aaPredicted RBP14.34□□□□□ -0.11
TPM4-208ENST00000588410 OR11H2Q8NH07 326 aa14.34□□□□□ -0.11
TPM4-208ENST00000588410 STARD9Q9P2P6 4700 aa14.34□□□□□ -0.11
TPM4-208ENST00000588410 DYNC2H1Q8NCM8 4307 aaKnown RBP14.33□□□□□ -0.12
TPM4-208ENST00000588410 LYRM1O43325 122 aa14.33□□□□□ -0.12
TPM4-208ENST00000588410 CFDP00746 253 aaPredicted RBP14.33□□□□□ -0.12
TPM4-208ENST00000588410 ATF4P18848 351 aaPredicted RBP14.33□□□□□ -0.12
TPM4-208ENST00000588410 AKR1C1Q04828 323 aa14.33□□□□□ -0.12
TPM4-208ENST00000588410 TRPT1Q86TN4 253 aaKnown RBP14.33□□□□□ -0.12
TPM4-208ENST00000588410 THAP8Q8NA92 274 aa14.33□□□□□ -0.12
TPM4-208ENST00000588410 PSENENQ9NZ42 101 aa14.33□□□□□ -0.12
TPM4-208ENST00000588410 FBXL17Q9UF56 701 aa14.33□□□□□ -0.12
TPM4-208ENST00000588410 SSSCA1O60232 199 aa14.32□□□□□ -0.12
TPM4-208ENST00000588410 SPP1P10451 314 aa14.32□□□□□ -0.12
TPM4-208ENST00000588410 EWSR1Q01844 656 aaKnown RBP eCLIP14.32□□□□□ -0.121e-6■■■□□ 16.2
TPM4-208ENST00000588410 TMEM41BQ5BJD5 291 aa14.32□□□□□ -0.12
TPM4-208ENST00000588410 OR4D5Q8NGN0 318 aa14.32□□□□□ -0.12
TPM4-208ENST00000588410 RAB40CQ96S21 281 aa14.32□□□□□ -0.12
TPM4-208ENST00000588410 C20orf85Q9H1P6 137 aa14.32□□□□□ -0.12
TPM4-208ENST00000588410 SEPSECSQ9HD40 501 aaKnown RBP14.32□□□□□ -0.12
TPM4-208ENST00000588410 SMCO3A2RU48 225 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 NUPR2A6NF83 97 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 PRSS46E5RG02 174 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 PLA2G10O15496 165 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 SCGB1D2O95969 90 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 IAH1Q2TAA2 248 aaPredicted RBP14.31□□□□□ -0.12
TPM4-208ENST00000588410 C1orf194Q5T5A4 169 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 GSKIPQ9P0R6 139 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 RYR2Q92736 4967 aa14.31□□□□□ -0.12
TPM4-208ENST00000588410 IGKV1OR2-108A0A075B7D4 117 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 ID1P41134 155 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 ACOT7LQ6ZUV0 252 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 BPIFCQ8NFQ6 507 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 MITD1Q8WV92 249 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 CCDC32Q9BV29 185 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 TENM2Q9NT68 2774 aa14.3□□□□□ -0.12
TPM4-208ENST00000588410 TCRBP04435 133 aa14.29□□□□□ -0.12
TPM4-208ENST00000588410 S100A7P31151 101 aa14.29□□□□□ -0.12
TPM4-208ENST00000588410 OR8I2Q8N0Y5 310 aa14.29□□□□□ -0.12
TPM4-208ENST00000588410 SMIM8Q96KF7 97 aa14.29□□□□□ -0.12
TPM4-208ENST00000588410 NUTF2P61970 127 aaKnown RBP14.28□□□□□ -0.12
TPM4-208ENST00000588410 ZNF846Q147U1 533 aa14.28□□□□□ -0.12
TPM4-208ENST00000588410 CEMP1Q6PRD7 247 aaPredicted RBP14.28□□□□□ -0.12
TPM4-208ENST00000588410 ZBTB8BQ8NAP8 495 aaPredicted RBP14.28□□□□□ -0.12
TPM4-208ENST00000588410 C11orf68Q9H3H3 251 aaKnown RBP14.28□□□□□ -0.12
TPM4-208ENST00000588410 KLK5Q9Y337 293 aaPredicted RBP14.28□□□□□ -0.12
TPM4-208ENST00000588410 TRAV6A0A075B6T7 132 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 ORM2P19652 201 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 TMEM144Q7Z5S9 345 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 LINC00052Q96N35 136 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 TMEM147Q9BVK8 224 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 MFFQ9GZY8 342 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 SLC45A2Q9UMX9 530 aa14.27□□□□□ -0.13
TPM4-208ENST00000588410 SACSQ9NZJ4 4579 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms