RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 CTDSP2O14595 271 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 SULT1A3P0DMM9 295 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 SULT1A4P0DMN0 295 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 HLA-DRB4P13762 266 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 SSBP1Q04837 148 aaKnown RBP10.14□□□□□ -0.79
ERCC1-205ENST00000587888 KLF9Q13886 244 aaPredicted RBP10.14□□□□□ -0.79
ERCC1-205ENST00000587888 SURF2Q15527 256 aaPredicted RBP10.14□□□□□ -0.79
ERCC1-205ENST00000587888 GDF5OSQ5U4N7 250 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 OR4C16Q8NGL9 310 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 RBKSQ9H477 322 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 PLA2G2EQ9NZK7 142 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 KCNIP3Q9Y2W7 256 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 TMEM56-RWDD3S4R434 201 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 HLA-DRB4X5D2U9 266 aa10.14□□□□□ -0.79
ERCC1-205ENST00000587888 AKAIN1P0CW23 69 aa10.13□□□□□ -0.79
ERCC1-205ENST00000587888 NKX2-1P43699 371 aaPredicted RBP10.13□□□□□ -0.79
ERCC1-205ENST00000587888 NMSQ5H8A3 153 aa10.13□□□□□ -0.79
ERCC1-205ENST00000587888 ZNF705AQ6ZN79 300 aaPredicted RBP10.13□□□□□ -0.79
ERCC1-205ENST00000587888 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
ERCC1-205ENST00000587888 OR51S1Q8NGJ8 323 aa10.13□□□□□ -0.79
ERCC1-205ENST00000587888 RNF125Q96EQ8 232 aa10.13□□□□□ -0.79
ERCC1-205ENST00000587888 U3KQ87 197 aa10.13□□□□□ -0.79
ERCC1-205ENST00000587888 A0A1B0GVY2 172 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 SMIM9A6NGZ8 99 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 ZFP92A6NM28 416 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 ZNF705FA8MVS1 300 aaPredicted RBP10.12□□□□□ -0.79
ERCC1-205ENST00000587888 RTL8CO15255 209 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 IFNA21P01568 189 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 ZNF705DP0CH99 300 aaPredicted RBP10.12□□□□□ -0.79
ERCC1-205ENST00000587888 ZNF705BP0CI00 300 aaPredicted RBP10.12□□□□□ -0.79
ERCC1-205ENST00000587888 ID1P41134 155 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 ZNF90Q03938 601 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 IL18Q14116 193 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 CLVS1Q8IUQ0 354 aaPredicted RBP10.12□□□□□ -0.79
ERCC1-205ENST00000587888 UBE2DNLQ8IWF7 75 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 LGI3Q8N145 548 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 DTD1Q8TEA8 209 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 NEU1Q99519 415 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 WDR12Q9GZL7 423 aaKnown RBP10.12□□□□□ -0.79
ERCC1-205ENST00000587888 CACFD1Q9UGQ2 172 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 PFDN2Q9UHV9 154 aa10.12□□□□□ -0.79
ERCC1-205ENST00000587888 IGLV2-18A0A075B6J9 118 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 TMEM189A5PLL7 270 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 HTN3P15516 51 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 AKR1C4P17516 323 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 CCR6P51684 374 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 MRPS10P82664 201 aaKnown RBP10.11□□□□□ -0.79
ERCC1-205ENST00000587888 OR2F1Q13607 317 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 GAMTQ14353 236 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 SMCO1Q147U7 214 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 LYZL2Q7Z4W2 148 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 COQ8AQ8NI60 647 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 SMIM4Q8WVI0 70 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 IL22RA2Q969J5 263 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 PPP1R14BQ96C90 147 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 DIRAS2Q96HU8 199 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 PRRT1Q99946 306 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
ERCC1-205ENST00000587888 HSPB7Q9UBY9 170 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 HERC2O95714 4834 aa10.11□□□□□ -0.79
ERCC1-205ENST00000587888 IGKV1D-37A0A075B6S9 117 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
ERCC1-205ENST00000587888 LYZP61626 148 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 SPCS2Q15005 226 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 FAM222AQ5U5X8 452 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 FOXI2Q6ZQN5 318 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 OR1S1Q8NH92 325 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 SLC35E1Q96K37 410 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 C7orf50Q9BRJ6 194 aaKnown RBP10.1□□□□□ -0.79
ERCC1-205ENST00000587888 NIPSNAP3BQ9BS92 247 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 SLC35B3Q9H1N7 401 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 RFNGQ9Y644 331 aa10.1□□□□□ -0.79
ERCC1-205ENST00000587888 SNRPGP15A8MWD9 76 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 F6UB75 175 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 SMIM18P0DKX4 95 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 GPX4P36969 197 aaPredicted RBP10.09□□□□□ -0.79
ERCC1-205ENST00000587888 PSMB3P49720 205 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 PSG9Q00887 426 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 LGALS9BQ3B8N2 356 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 FAM78BQ5VT40 261 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 OR8G2PQ6IF36 304 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 ZNF709Q8N972 641 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 MCUBQ9NWR8 336 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 SCP2D1Q9UJQ7 156 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 PAIP2BQ9ULR5 123 aaKnown RBP10.09□□□□□ -0.79
ERCC1-205ENST00000587888 DNAH10Q8IVF4 4471 aa10.09□□□□□ -0.79
ERCC1-205ENST00000587888 A0A0B4J2A0 478 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 CTDSPLO15194 276 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 FABP1P07148 127 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 SUPT4H1P63272 117 aaKnown RBP10.08□□□□□ -0.8
ERCC1-205ENST00000587888 C1orf194Q5T5A4 169 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 OR8I2Q8N0Y5 310 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 SCGB3A2Q96PL1 93 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 SHPKQ9UHJ6 478 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 GOLT1BQ9Y3E0 138 aa10.08□□□□□ -0.8
ERCC1-205ENST00000587888 ANKRD20A5PA0PJZ0 165 aa10.07□□□□□ -0.8
ERCC1-205ENST00000587888 SOCS3O14543 225 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms