RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 SPSB3Q6PJ21 355 aa11.52□□□□□ -0.57
NFIX-208ENST00000587260 CLEC19AQ6UXS0 136 aa11.52□□□□□ -0.57
NFIX-208ENST00000587260 DPPA3Q6W0C5 159 aa11.52□□□□□ -0.57
NFIX-208ENST00000587260 TMEM182Q6ZP80 229 aaPredicted RBP11.52□□□□□ -0.57
NFIX-208ENST00000587260 BPIFCQ8NFQ6 507 aa11.52□□□□□ -0.57
NFIX-208ENST00000587260 UBE2E2Q96LR5 201 aa11.52□□□□□ -0.57
NFIX-208ENST00000587260 OR2T8A6NH00 312 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 PPP5D1E7EU14 171 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 YIF1AO95070 293 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 TOMM40O96008 361 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 LGALS1P09382 135 aaKnown RBP11.51□□□□□ -0.57
NFIX-208ENST00000587260 ADMP35318 185 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 PLP1P60201 277 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 NSUN5P1Q3KNT7 163 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 TIGITQ495A1 244 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 TMEM41BQ5BJD5 291 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 FAM74A1Q5RGS3 127 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 AKR1C8PQ5T2L2 129 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 C12orf54Q6X4T0 127 aa11.51□□□□□ -0.57
NFIX-208ENST00000587260 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
NFIX-208ENST00000587260 NUPL2O15504 423 aaKnown RBP11.5□□□□□ -0.57
NFIX-208ENST00000587260 TGOLN2O43493 480 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 PSG1P11464 419 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 M6PRP20645 277 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 GATA2P23769 480 aaPredicted RBP11.5□□□□□ -0.57
NFIX-208ENST00000587260 CDX1P47902 265 aaPredicted RBP11.5□□□□□ -0.57
NFIX-208ENST00000587260 ZNF616Q08AN1 781 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 ACOT6Q3I5F7 207 aaPredicted RBP11.5□□□□□ -0.57
NFIX-208ENST00000587260 PXDC1Q5TGL8 231 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 Q6ZRG5 221 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 C8orf86Q6ZUL3 223 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 SAT2Q96F10 170 aaPredicted RBP11.5□□□□□ -0.57
NFIX-208ENST00000587260 CHRDL1Q9BU40 450 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 RPRMQ9NS64 109 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 OR2C1O95371 312 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 C3orf56Q8N813 242 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 C4orf3Q8WVX3 66 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 ZNF414Q96IQ9 312 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 DUX3Q96PT4 197 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 CITED1Q99966 193 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 VSIRQ9H7M9 311 aa11.5□□□□□ -0.57
NFIX-208ENST00000587260 NMBP08949 121 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 ARL3P36405 182 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 ELLP55199 621 aaPredicted RBP11.49□□□□□ -0.57
NFIX-208ENST00000587260 CLLU1Q5K131 121 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 ZNF600Q6ZNG1 722 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
NFIX-208ENST00000587260 OR51G1Q8NGK1 321 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 Q8WTZ3 238 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 MDFIQ99750 246 aa11.49□□□□□ -0.57
NFIX-208ENST00000587260 IGHV4OR15-8A0A075B7B6 117 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 A0A087WW49 117 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 WI2-2373I1.2A0A1W2PRP0 233 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 SEC14L6B5MCN3 397 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 I3L521 148 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 FHITP49789 147 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 RAB2AP61019 212 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 OR10G4Q8NGN3 311 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 OR10G9Q8NGN4 311 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 OR10G7Q8NGN6 311 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 GATAD1Q8WUU5 269 aa11.48□□□□□ -0.57
NFIX-208ENST00000587260 PEF1Q9UBV8 284 aaKnown RBP11.48□□□□□ -0.57
NFIX-208ENST00000587260 ELOA3CA0A087WX78 387 aaPredicted RBP11.47□□□□□ -0.57
NFIX-208ENST00000587260 IGHV3-35A0A0C4DH35 117 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 ZNF705EA8MWA4 302 aaPredicted RBP11.47□□□□□ -0.57
NFIX-208ENST00000587260 BMPR1BO00238 502 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 RAB14P61106 215 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 RELQ04864 619 aaPredicted RBP11.47□□□□□ -0.57
NFIX-208ENST00000587260 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 PATE2Q6UY27 113 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 NDUFA11Q86Y39 141 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 OR1L4Q8NGR5 311 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 TMEM37Q8WXS4 190 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 PFDN5Q99471 154 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 ZNF747Q9BV97 191 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 DNAJC4Q9NNZ3 241 aa11.47□□□□□ -0.57
NFIX-208ENST00000587260 DNHD1Q96M86 4753 aa11.46□□□□□ -0.57
NFIX-208ENST00000587260 OR5G3P0C626 314 aa11.46□□□□□ -0.57
NFIX-208ENST00000587260 OR11H1Q8NG94 326 aa11.46□□□□□ -0.57
NFIX-208ENST00000587260 LYPD6BQ8NI32 183 aa11.46□□□□□ -0.57
NFIX-208ENST00000587260 MBD3L1Q8WWY6 194 aa11.46□□□□□ -0.57
NFIX-208ENST00000587260 RCC1LQ96I51 464 aaKnown RBP11.46□□□□□ -0.57
NFIX-208ENST00000587260 RNF2Q99496 336 aa11.46□□□□□ -0.57
NFIX-208ENST00000587260 ACTR3CQ9C0K3 210 aaPredicted RBP11.46□□□□□ -0.57
NFIX-208ENST00000587260 MRPL27Q9P0M9 148 aaKnown RBP11.46□□□□□ -0.57
NFIX-208ENST00000587260 TRAV1-1A0A0B4J248 108 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 GGCTO75223 188 aaKnown RBP11.45□□□□□ -0.58
NFIX-208ENST00000587260 HYPMO75409 117 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 RHOBP62745 196 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 ZNF726P1Q15940 193 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 FAM213BQ8TBF2 198 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 RNF125Q96EQ8 232 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 RAX2Q96IS3 184 aa11.45□□□□□ -0.58
NFIX-208ENST00000587260 PUS1Q9Y606 427 aaKnown RBP eCLIP11.45□□□□□ -0.58
NFIX-208ENST00000587260 CTXND1A0A1B0GTU2 59 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms