RNA–Protein interactions for RNA: ENST00000587220.5

ZNF540-205, Transcript of zinc finger protein 540, humanhuman

TSL 2

Gene ZNF540, Length 576 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-205ENST00000587220 SMCO1Q147U7 214 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 LRRC37A5PQ49AS3 106 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 FAM74A1Q5RGS3 127 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 LRTM2Q8N967 370 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 OR1S2Q8NGQ3 325 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 GALNT14Q96FL9 552 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 CHRDL1Q9BU40 450 aa7.97□□□□□ -1.13
ZNF540-205ENST00000587220 RYR2Q92736 4967 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 CRYM-AS1A6NIL9 109 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 C15orf62A8K5M9 175 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 H0YIZ8 118 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 K7EMT4 169 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 GNG7O60262 68 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 IFNA17P01571 189 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 IGKV1-39P01597 117 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 IGKV1D-39P04432 117 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 SULT1A2P50226 295 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 CAV2P51636 162 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 MFAP4P55083 255 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 HSPE1P61604 102 aaKnown RBP7.96□□□□□ -1.14
ZNF540-205ENST00000587220 SLC35G3Q8N808 338 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 LYPD6BQ8NI32 183 aa7.96□□□□□ -1.14
ZNF540-205ENST00000587220 RNASE11Q8TAA1 199 aaKnown RBP7.96□□□□□ -1.14
ZNF540-205ENST00000587220 C3orf85A0A1B0GTC6 90 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
ZNF540-205ENST00000587220 MT-CO2P00403 227 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 IGHV3-48P01763 117 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 CTSGP08311 255 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 ADMP35318 185 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 RAB5CP51148 216 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 RND3P61587 244 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 SRPXP78539 464 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 SPINK9Q5DT21 86 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 TMEM268Q5VZI3 342 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 CCDC71LQ8N9Z2 235 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 ZNF114Q8NC26 417 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 RRNAD1Q96FB5 475 aaKnown RBP7.95□□□□□ -1.14
ZNF540-205ENST00000587220 NARS2Q96I59 477 aaKnown RBP7.95□□□□□ -1.14
ZNF540-205ENST00000587220 TXN2Q99757 166 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 KCNIP3Q9Y2W7 256 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 DYNC2H1Q8NCM8 4307 aaKnown RBP7.95□□□□□ -1.14
ZNF540-205ENST00000587220 STARD9Q9P2P6 4700 aa7.95□□□□□ -1.14
ZNF540-205ENST00000587220 IGHV3-49A0A0A0MS15 119 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 I3L2K1 104 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 DEDDO75618 318 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 BMI1P35226 326 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 SUB1P53999 127 aaKnown RBP eCLIP7.94□□□□□ -1.14
ZNF540-205ENST00000587220 IZUMO4Q1ZYL8 232 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 ATRAIDQ6UW56 229 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 IQCF2Q8IXL9 164 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 STPG3Q8N7X2 389 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 TMEM116Q8NCL8 245 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 TP53RKQ96S44 253 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 GINS3Q9BRX5 216 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 RHPN1-AS1Q9BWJ2 59 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 SMDT1Q9H4I9 107 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 ENY2Q9NPA8 101 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 UQCC1Q9NVA1 299 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 SMPXQ9UHP9 88 aa7.94□□□□□ -1.14
ZNF540-205ENST00000587220 IGKV3-7A0A075B6H7 116 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 BORCS7-ASMTA0A0B4J1R7 106 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 IGHV7-4-1A0A0J9YVY3 117 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 DUXBA0A1W2PPF3 345 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 ZNF705EA8MWA4 302 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-205ENST00000587220 E5RGE8 158 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 K7EPK0 472 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 CORTO00230 105 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 SCGB2A1O75556 95 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 ADAP1O75689 374 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 IGKV1-5P01602 117 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 CD5P06127 495 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 SEC11BP0C7V7 166 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 RPL12P30050 165 aaKnown RBP7.93□□□□□ -1.14
ZNF540-205ENST00000587220 FCGR2BP31994 310 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-205ENST00000587220 NPBWR1P48145 328 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 TFPI2P48307 235 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 HOXA1P49639 335 aaPredicted RBP7.93□□□□□ -1.14
ZNF540-205ENST00000587220 PAFAH1B2P68402 229 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 RAB32Q13637 225 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 DEFB135Q30KP9 77 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 SP6Q3SY56 376 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 Q6ZWC4 215 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 TMED6Q8WW62 240 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 OR10C1Q96KK4 312 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 RNF2Q99496 336 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 OVOL2Q9BRP0 275 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 OR5AC2Q9NZP5 309 aa7.93□□□□□ -1.14
ZNF540-205ENST00000587220 STRAPQ9Y3F4 350 aaKnown RBP7.93□□□□□ -1.14
ZNF540-205ENST00000587220 IGHV3OR16-13A0A075B7E8 117 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 IGHV3-74A0A0B4J1X5 117 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 CXorf65A6NEN9 183 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 FAM74A7A6NL05 159 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 F8W036 122 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 UBE2CO00762 179 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 CHEK1O14757 476 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 ST8SIA3O43173 380 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 SPRY2O43597 315 aa7.92□□□□□ -1.14
ZNF540-205ENST00000587220 RPL35AP18077 110 aaKnown RBP7.92□□□□□ -1.14
ZNF540-205ENST00000587220 PVALBP20472 110 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms