RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
CXXC1-208ENST00000587170 RNF125Q96EQ8 232 aa9.94□□□□□ -0.82
CXXC1-208ENST00000587170 GOLT1BQ9Y3E0 138 aa9.94□□□□□ -0.82
CXXC1-208ENST00000587170 TMED3Q9Y3Q3 217 aa9.94□□□□□ -0.82
CXXC1-208ENST00000587170 CDS2O95674 445 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 IGKV3-20P01619 116 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 PSG1P11464 419 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 TBPP20226 339 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 RORCP51449 518 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 DAD1P61803 113 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 SP6Q3SY56 376 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 ETFRF1Q6IPR1 90 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 SNX29P2Q8IUI4 249 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 NPIPB3Q92617 1050 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 TMEM222Q9H0R3 208 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 HEYLQ9NQ87 328 aaPredicted RBP9.93□□□□□ -0.82
CXXC1-208ENST00000587170 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.93□□□□□ -0.82
CXXC1-208ENST00000587170 KLK11Q9UBX7 282 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 MYCBP2O75592 4640 aa9.93□□□□□ -0.82
CXXC1-208ENST00000587170 ISLRO14498 428 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 ID1P41134 155 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 PSG9Q00887 426 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 RNASE10Q5GAN6 216 aaKnown RBP9.92□□□□□ -0.82
CXXC1-208ENST00000587170 NMSQ5H8A3 153 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 C1orf194Q5T5A4 169 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 OR51G1Q8NGK1 321 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 LHFPL5Q8TAF8 219 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 GPR146Q96CH1 333 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 ABHD1Q96SE0 405 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 Q9H521 79 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 COPZ2Q9P299 210 aa9.92□□□□□ -0.82
CXXC1-208ENST00000587170 A0A0J9YX75 114 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 SMIM31A0A1B0GVY4 71 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 SUPT4H1P63272 117 aaKnown RBP9.91□□□□□ -0.82
CXXC1-208ENST00000587170 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 SAMD13Q5VXD3 122 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 AMTNQ6UX39 209 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 OR4B1Q8NGF8 309 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 OR13C8Q8NGS7 320 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 RNASE11Q8TAA1 199 aaKnown RBP9.91□□□□□ -0.82
CXXC1-208ENST00000587170 ZFAND1Q8TCF1 268 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 GLYATL2Q8WU03 294 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 RBPMSQ93062 196 aaKnown RBP9.91□□□□□ -0.82
CXXC1-208ENST00000587170 YIPF6Q96EC8 236 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 ACY3Q96HD9 319 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 FAT1Q14517 4588 aa9.91□□□□□ -0.82
CXXC1-208ENST00000587170 VPS13BQ7Z7G8 4022 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 CD3DP04234 171 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 ELK1P19419 428 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 GSG1LQ6UXU4 331 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 NOXA1Q86UR1 476 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 TERB2Q8NHR7 220 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 COQ8AQ8NI60 647 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 IGF2BP2-AS1Q96M15 143 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 LINC00052Q96N35 136 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 ATG101Q9BSB4 218 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 COMMD3Q9UBI1 195 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 CACNG5Q9UF02 275 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 CACFD1Q9UGQ2 172 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 PFDN2Q9UHV9 154 aa9.9□□□□□ -0.82
CXXC1-208ENST00000587170 IGKV1D-37A0A075B6S9 117 aa9.89□□□□□ -0.83
CXXC1-208ENST00000587170 F6UB75 175 aa9.89□□□□□ -0.83
CXXC1-208ENST00000587170 OR5AC1P0C628 307 aa9.89□□□□□ -0.83
CXXC1-208ENST00000587170 TSPOP30536 169 aa9.89□□□□□ -0.83
CXXC1-208ENST00000587170 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
CXXC1-208ENST00000587170 C7orf50Q9BRJ6 194 aaKnown RBP9.89□□□□□ -0.83
CXXC1-208ENST00000587170 MTFP1Q9UDX5 166 aa9.89□□□□□ -0.83
CXXC1-208ENST00000587170 PLAC8L1A1L4L8 177 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 CEBPZOSA8MTT3 80 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 MEOX2P50222 304 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 EBLN2Q6P2I7 272 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 SELENOHQ8IZQ5 122 aaKnown RBP9.88□□□□□ -0.83
CXXC1-208ENST00000587170 MARCH1Q8TCQ1 289 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 PBDC1Q9BVG4 233 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 MAGT1Q9H0U3 335 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 RPRMQ9NS64 109 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 DOK5Q9P104 306 aa9.88□□□□□ -0.83
CXXC1-208ENST00000587170 SRRM2Q9UQ35 2752 aaKnown RBP9.87□□□□□ -0.83
CXXC1-208ENST00000587170 TEX13DA0A0J9YY54 714 aaPredicted RBP9.87□□□□□ -0.83
CXXC1-208ENST00000587170 HPGDSO60760 199 aa9.87□□□□□ -0.83
CXXC1-208ENST00000587170 LSM3P62310 102 aaKnown RBP9.87□□□□□ -0.83
CXXC1-208ENST00000587170 KLF9Q13886 244 aaPredicted RBP9.87□□□□□ -0.83
CXXC1-208ENST00000587170 SPATA12Q7Z6I5 190 aa9.87□□□□□ -0.83
CXXC1-208ENST00000587170 OR52I2Q8NH67 350 aa9.87□□□□□ -0.83
CXXC1-208ENST00000587170 RTBDNQ9BSG5 229 aaPredicted RBP9.87□□□□□ -0.83
CXXC1-208ENST00000587170 NAA60Q9H7X0 242 aa9.87□□□□□ -0.83
CXXC1-208ENST00000587170 LINC00588Q9Y4M8 146 aa9.87□□□□□ -0.83
CXXC1-208ENST00000587170 U3KQ87 197 aa9.87□□□□□ -0.83
CXXC1-208ENST00000587170 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
CXXC1-208ENST00000587170 BTF3P20290 206 aaKnown RBP9.86□□□□□ -0.83
CXXC1-208ENST00000587170 CCL18P55774 89 aa9.86□□□□□ -0.83
CXXC1-208ENST00000587170 ZNF90Q03938 601 aa9.86□□□□□ -0.83
CXXC1-208ENST00000587170 TMEM268Q5VZI3 342 aa9.86□□□□□ -0.83
CXXC1-208ENST00000587170 TMEM229BQ8NBD8 167 aa9.86□□□□□ -0.83
CXXC1-208ENST00000587170 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
CXXC1-208ENST00000587170 C17orf77Q96MU5 243 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms