RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 SRRQ9GZT4 340 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 MAGT1Q9H0U3 335 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 TMED3Q9Y3Q3 217 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 ZNF701M0R085 212 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 DEFB4AO15263 64 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 PITX3O75364 302 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 GPX4P36969 197 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 ZNF90Q03938 601 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 PSMG4Q5JS54 123 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 ACTL10Q5JWF8 245 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 CEMP1Q6PRD7 247 aaPredicted RBP13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 LRTM2Q8N967 370 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 RNF125Q96EQ8 232 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 ALMS1Q8TCU4 4167 aa13.94□□□□□ -0.18
CLPTM1-206ENST00000586975 WRBO00258 174 aa13.93□□□□□ -0.18
CLPTM1-206ENST00000586975 MED6O75586 246 aa13.93□□□□□ -0.18
CLPTM1-206ENST00000586975 BAK1Q16611 211 aa13.93□□□□□ -0.18
CLPTM1-206ENST00000586975 SIGLEC15Q6ZMC9 328 aa13.93□□□□□ -0.18
CLPTM1-206ENST00000586975 BUB3O43684 328 aa13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 LY6G6CO95867 125 aa13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 SLC25A6P12236 298 aa13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 LYZP61626 148 aa13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 OR2F1Q13607 317 aa13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 GGNBP1Q5YKI7 109 aa13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 TRPT1Q86TN4 253 aaKnown RBP13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 KLK5Q9Y337 293 aaPredicted RBP13.92□□□□□ -0.18
CLPTM1-206ENST00000586975 HYDINQ4G0P3 5121 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 FAM90A26D6RGX4 464 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 SYNGR2O43760 224 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 FABP1P07148 127 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 ATF4P18848 351 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 SNRPD3P62318 126 aaKnown RBP13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 RPP30P78346 268 aaKnown RBP13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 PHLDA1Q8WV24 401 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 PPP1R14BQ96C90 147 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 CIB3Q96Q77 187 aaPredicted RBP13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 RAB40CQ96S21 281 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 NRN1Q9NPD7 142 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 FBXL17Q9UF56 701 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 PFDN2Q9UHV9 154 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 FLVCR2Q9UPI3 526 aa13.91□□□□□ -0.18
CLPTM1-206ENST00000586975 IGKV1D-37A0A075B6S9 117 aa13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 NAP1L6A6NFF2 107 aa13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 NANOS2P60321 138 aaKnown RBP13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 SPANXN5Q5MJ07 72 aa13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 MORN3Q6PF18 240 aaPredicted RBP13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 C11orf45Q8TAV5 145 aa13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 CLEC5AQ9NY25 188 aa13.9□□□□□ -0.18
CLPTM1-206ENST00000586975 C9orf170A2RU37 121 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 SNRPGP15A8MWD9 76 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 H3BP45 60 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 ADAP1O75689 374 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 SPP1P10451 314 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 C4BPBP20851 252 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 LINC00476Q8WZB0 136 aa13.89□□□□□ -0.19
CLPTM1-206ENST00000586975 CENPXA8MT69 81 aa13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 NDUFB6O95139 128 aa13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 GIG44P09565 113 aaPredicted RBP13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 NUP62P37198 522 aaPredicted RBP13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 UBE2MP61081 183 aaKnown RBP13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 OR8G2PQ6IF36 304 aa13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 COQ8AQ8NI60 647 aa13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 C11orf68Q9H3H3 251 aaKnown RBP13.88□□□□□ -0.19
CLPTM1-206ENST00000586975 C4orf46Q504U0 113 aa13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 TMEM41BQ5BJD5 291 aa13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 GSG1LQ6UXU4 331 aa13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 LINC00052Q96N35 136 aa13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 TRGV9Q99603 122 aa13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 MFFQ9GZY8 342 aa13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 STRAPQ9Y3F4 350 aaKnown RBP13.87□□□□□ -0.19
CLPTM1-206ENST00000586975 IFNA21P01568 189 aa13.86□□□□□ -0.19
CLPTM1-206ENST00000586975 OR4E1P0C645 316 aa13.86□□□□□ -0.19
CLPTM1-206ENST00000586975 ANXA7P20073 488 aaKnown RBP13.86□□□□□ -0.19
CLPTM1-206ENST00000586975 POLR2GP62487 172 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLPTM1-206ENST00000586975 SDHCQ99643 169 aaPredicted RBP13.86□□□□□ -0.19
CLPTM1-206ENST00000586975 IGKV1OR2-108A0A075B7D4 117 aa13.85□□□□□ -0.19
CLPTM1-206ENST00000586975 IGHV4-28A0A0C4DH34 117 aa13.85□□□□□ -0.19
CLPTM1-206ENST00000586975 AKR1C1Q04828 323 aa13.85□□□□□ -0.19
CLPTM1-206ENST00000586975 OR8I2Q8N0Y5 310 aa13.85□□□□□ -0.19
CLPTM1-206ENST00000586975 SMCO3A2RU48 225 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 SSSCA1O60232 199 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 IGKV3-20P01619 116 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 IL7P13232 177 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 ID1P41134 155 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 NKX2-1P43699 371 aaPredicted RBP13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 DEFB1P60022 68 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 THAP8Q8NA92 274 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 WDR12Q9GZL7 423 aaKnown RBP13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 SEPSECSQ9HD40 501 aaKnown RBP13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 PSENENQ9NZ42 101 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 XCL2Q9UBD3 114 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 TBC1D24Q9ULP9 559 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 AGRNO00468 2067 aa13.84□□□□□ -0.19
CLPTM1-206ENST00000586975 H3BMM0 161 aa13.83□□□□□ -0.2
CLPTM1-206ENST00000586975 SCGB1D2O95969 90 aa13.83□□□□□ -0.2
CLPTM1-206ENST00000586975 RBMY1A1P0DJD3 496 aaKnown RBP13.83□□□□□ -0.2
CLPTM1-206ENST00000586975 RBMY1CP0DJD4 496 aa13.83□□□□□ -0.2
CLPTM1-206ENST00000586975 ORM2P19652 201 aa13.83□□□□□ -0.2
CLPTM1-206ENST00000586975 GATA2P23769 480 aaPredicted RBP13.83□□□□□ -0.2
CLPTM1-206ENST00000586975 NUTF2P61970 127 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms