RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 KMT2AQ03164 3969 aa12.41□□□□□ -0.42
MBD3-204ENST00000585967 OR8G2PQ6IF36 304 aa12.41□□□□□ -0.42
MBD3-204ENST00000585967 RNF125Q96EQ8 232 aa12.41□□□□□ -0.42
MBD3-204ENST00000585967 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
MBD3-204ENST00000585967 IGHV4-28A0A0C4DH34 117 aa12.4□□□□□ -0.42
MBD3-204ENST00000585967 KNCNA6PVL3 124 aa12.4□□□□□ -0.42
MBD3-204ENST00000585967 ZNF705EA8MWA4 302 aaPredicted RBP12.4□□□□□ -0.42
MBD3-204ENST00000585967 FAM90A26D6RGX4 464 aa12.4□□□□□ -0.42
MBD3-204ENST00000585967 RAB11AP62491 216 aa12.4□□□□□ -0.42
MBD3-204ENST00000585967 KLF9Q13886 244 aaPredicted RBP12.4□□□□□ -0.42
MBD3-204ENST00000585967 USF2Q15853 346 aaPredicted RBP12.4□□□□□ -0.42
MBD3-204ENST00000585967 SAMD13Q5VXD3 122 aa12.4□□□□□ -0.42
MBD3-204ENST00000585967 TRAV10A0A0B4J240 114 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 IGLL5B9A064 214 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 BUB3O43684 328 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 PSG1P11464 419 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 C4BPBP20851 252 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 S100A7P31151 101 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 GPX4P36969 197 aaPredicted RBP12.39□□□□□ -0.43
MBD3-204ENST00000585967 ID1P41134 155 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 RPP30P78346 268 aaKnown RBP12.39□□□□□ -0.43
MBD3-204ENST00000585967 MCFD2Q8NI22 146 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 DEDD2Q8WXF8 326 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 RAB40CQ96S21 281 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 PBDC1Q9BVG4 233 aa12.39□□□□□ -0.43
MBD3-204ENST00000585967 MED6O75586 246 aa12.38□□□□□ -0.43
MBD3-204ENST00000585967 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
MBD3-204ENST00000585967 PPP1R14BQ96C90 147 aa12.38□□□□□ -0.43
MBD3-204ENST00000585967 RBKSQ9H477 322 aa12.38□□□□□ -0.43
MBD3-204ENST00000585967 DEDDO75618 318 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 CFDP00746 253 aaPredicted RBP12.37□□□□□ -0.43
MBD3-204ENST00000585967 HLA-DMBP28068 263 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 NKX2-1P43699 371 aaPredicted RBP12.37□□□□□ -0.43
MBD3-204ENST00000585967 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 LYZL2Q7Z4W2 148 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 TOMM5Q8N4H5 51 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 COQ8AQ8NI60 647 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 TMEM170AQ8WVE7 144 aa12.37□□□□□ -0.43
MBD3-204ENST00000585967 CIB3Q96Q77 187 aaPredicted RBP12.37□□□□□ -0.43
MBD3-204ENST00000585967 GIG44P09565 113 aaPredicted RBP12.36□□□□□ -0.43
MBD3-204ENST00000585967 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
MBD3-204ENST00000585967 S100A5P33763 92 aa12.36□□□□□ -0.43
MBD3-204ENST00000585967 SUPT4H1P63272 117 aaKnown RBP12.36□□□□□ -0.43
MBD3-204ENST00000585967 C1orf194Q5T5A4 169 aa12.36□□□□□ -0.43
MBD3-204ENST00000585967 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
MBD3-204ENST00000585967 SLIRPQ9GZT3 109 aaKnown RBP12.36□□□□□ -0.43
MBD3-204ENST00000585967 CLEC5AQ9NY25 188 aa12.36□□□□□ -0.43
MBD3-204ENST00000585967 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
MBD3-204ENST00000585967 TMEM189A5PLL7 270 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 SNRPGP15A8MWD9 76 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 H3BMQ9 156 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 RBMY1A1P0DJD3 496 aaKnown RBP12.35□□□□□ -0.43
MBD3-204ENST00000585967 RBMY1CP0DJD4 496 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 SLC25A6P12236 298 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 VAMP1P23763 118 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 TNFSF8P32971 234 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 PSMB3P49720 205 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 MEOX2P50222 304 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 LYZP61626 148 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 RBMY1FQ15415 496 aaKnown RBP12.35□□□□□ -0.43
MBD3-204ENST00000585967 PYDC2Q56P42 97 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 SLC25A21Q9BQT8 299 aaPredicted RBP12.35□□□□□ -0.43
MBD3-204ENST00000585967 PRR13Q9NZ81 148 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 PAIP2BQ9ULR5 123 aaKnown RBP12.35□□□□□ -0.43
MBD3-204ENST00000585967 X6R8D5 127 aa12.35□□□□□ -0.43
MBD3-204ENST00000585967 TEX48A0A1B0GUV7 120 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 H3BMM0 161 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 GAMTQ14353 236 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 Q6ZTC4 211 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 CSNK1G2-AS1Q8NCQ2 148 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 RNF126Q9BV68 326 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 XCL2Q9UBD3 114 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 TMED3Q9Y3Q3 217 aa12.34□□□□□ -0.43
MBD3-204ENST00000585967 SMIM9A6NGZ8 99 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 GGNBP1Q5YKI7 109 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 FOXI2Q6ZQN5 318 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 OR8I2Q8N0Y5 310 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 TRGV9Q99603 122 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 APLNQ9ULZ1 77 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
MBD3-204ENST00000585967 IGHV4-4A0A075B6R2 117 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 ISLRO14498 428 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 AMBPP02760 352 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 GALR1P47211 349 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 EBLN2Q6P2I7 272 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 LRTM2Q8N967 370 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 LINC00052Q96N35 136 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 NEU1Q99519 415 aa12.32□□□□□ -0.44
MBD3-204ENST00000585967 ELOA3CA0A087WX78 387 aaPredicted RBP12.31□□□□□ -0.44
MBD3-204ENST00000585967 DEFB131BA0A096LNP1 70 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 CCDC160A6NGH7 325 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 INPP1P49441 399 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 ZNF90Q03938 601 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 CLUHP3Q96NS8 147 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 GPR82Q96P67 336 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 SOSTQ9BQB4 213 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 NDUFAF3Q9BU61 184 aa12.31□□□□□ -0.44
MBD3-204ENST00000585967 SAV1Q9H4B6 383 aaPredicted RBP12.31□□□□□ -0.44
MBD3-204ENST00000585967 SLC45A2Q9UMX9 530 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms