RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	KLHDC1	Q8N7A1	406 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	EEF1AKMT3	Q96AZ1	226 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PBDC1	Q9BVG4	233 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TRBV7-1	A0A0A6YYK4	115 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PSMB11	A5LHX3	300 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PPIF	P30405	207 aa	Known RBP	13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	ZNF90	Q03938	601 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	SPSB3	Q6PJ21	355 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	GATAD1	Q8WUU5	269 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	RAB24	Q969Q5	203 aa		13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	MRPL32	Q9BYC8	188 aa	Known RBP	13.88	□□□□□ -0.19
RBFOX1-222	ENST00000585867	ELOA3C	A0A087WX78	387 aa	Predicted RBP	13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	COX7A2P2	O60397	106 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TRGV3	P03979	118 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	YPEL3	P61236	119 aa	Predicted RBP	13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	SLC35B1	P78383	322 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	ATP5G2	Q06055	141 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	GCSAML	Q5JQS6	135 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	C10orf99	Q6UWK7	81 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	LCN15	Q6UWW0	184 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	USMG5	Q96IX5	58 aa		13.87	□□□□□ -0.19
RBFOX1-222	ENST00000585867	GATA2	P23769	480 aa	Predicted RBP	13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	CFHR3	Q02985	330 aa		13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TIGIT	Q495A1	244 aa		13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	OR5AU1	Q8NGC0	362 aa		13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	ZNF502	Q8TBZ5	544 aa		13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	DNAJC4	Q9NNZ3	241 aa		13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	FUT9	Q9Y231	359 aa		13.86	□□□□□ -0.19
RBFOX1-222	ENST00000585867	ATR	Q13535	2644 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TOMM40	O96008	361 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	IFNA1	P01562	189 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	OR5G3	P0C626	314 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	RD3L	P0DJH9	198 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TPPP2	P59282	170 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TAS2R45	P59539	299 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PLP1	P60201	277 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	SSX7	Q7RTT5	188 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	WIPF2	Q8TF74	440 aa	Predicted RBP	13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	FAM210A	Q96ND0	272 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867	MS4A10	Q96PG2	267 aa		13.85	□□□□□ -0.19
RBFOX1-222	ENST00000585867		A0A0G2JLM5	398 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867		A0A1B0GV50	99 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	NUPL2	O15504	423 aa	Known RBP	13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	IGKV1-17	P01599	117 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	IGLV1-40	P01703	118 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PPT1	P50897	306 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PMS2P11	Q13670	270 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	FAM78B	Q5VT40	261 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	C10orf113	Q5VZT2	155 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	S100A7A	Q86SG5	101 aa		13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867	FBN1	P35555	2871 aa	Known RBP	13.84	□□□□□ -0.19
RBFOX1-222	ENST00000585867		F8W735	103 aa	Predicted RBP	13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	HYPM	O75409	117 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	CXorf1	O96002	111 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	STAG3L2	P0CL84	134 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	STAG3L3	P0CL85	134 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PF4V1	P10720	104 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PSG1	P11464	419 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TAGLN2	P37802	199 aa	Known RBP	13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	PEA15	Q15121	130 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	FAM209B	Q5JX69	171 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TEX38	Q6PEX7	206 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	OR51G1	Q8NGK1	321 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867		Q8WTZ3	238 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	MDFI	Q99750	246 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	SMDT1	Q9H4I9	107 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	TECR	Q9NZ01	308 aa	Known RBP	13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867		S4R3C0	116 aa		13.83	□□□□□ -0.19
RBFOX1-222	ENST00000585867	IGHG4	P01861	327 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	PSMB3	P49720	205 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	FGF8	P55075	233 aa	Predicted RBP	13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	KRTAP10-3	P60369	221 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	GUK1	Q16774	197 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	KHDC3L	Q587J8	217 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	C12orf54	Q6X4T0	127 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	OR4X2	Q8NGF9	303 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	WFDC12	Q8WWY7	111 aa		13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	EIF5A2	Q9GZV4	153 aa	Known RBP	13.83	□□□□□ -0.2
RBFOX1-222	ENST00000585867	OR2T8	A6NH00	312 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867		I3L521	148 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	IGHV3-23	P01764	117 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	S100A7	P31151	101 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CCL20	P78556	96 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	DEFA5	Q01523	94 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	C11orf44	Q8N8P7	122 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	OR1B1	Q8NGR6	318 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	TMEM37	Q8WXS4	190 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	SEPSECS	Q9HD40	501 aa	Known RBP	13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	TREM1	Q9NP99	234 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	MANBAL	Q9NQG1	85 aa		13.82	□□□□□ -0.2
RBFOX1-222	ENST00000585867	RBFOX3	A6NFN3	312 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	OR2C1	O95371	312 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ELANE	P08246	267 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	CD28	P10747	220 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	ORM2	P19652	201 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	GPR183	P32249	361 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	FOXE3	Q13461	319 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	TOR2A	Q5JU69	321 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	PQLC2	Q6ZP29	291 aa		13.81	□□□□□ -0.2
RBFOX1-222	ENST00000585867	DOK5	Q9P104	306 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms