RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 C19orf84I3L1E1 186 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 CT45A10P0DMU9 189 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 NPPCP23582 126 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 MFAP4P55083 255 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 S100A7AQ86SG5 101 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 BTF3L4Q96K17 158 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 AAMDCQ9H7C9 122 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 SRD5A3Q9H8P0 318 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 TRAV40A0A0B4J280 105 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 CGB1A6NKQ9 187 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 J3KRW8 73 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 PRTN3P24158 256 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 GPR183P32249 361 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 LINC00311Q8N616 119 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 NRGNQ92686 78 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 PIMREGQ9BSJ6 248 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 WNK1Q9H4A3 2382 aa9.99□□□□□ -0.81
SMARCA4-208ENST00000585799 H0Y8G0 127 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 COL8A1P27658 744 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 COMPP49747 757 aaPredicted RBP9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 STXBP6Q8NFX7 210 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 MRPL32Q9BYC8 188 aaKnown RBP9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 FBXL7Q9UJT9 491 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 ABCA2Q9BZC7 2435 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 ELOA3CA0A087WX78 387 aaPredicted RBP9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 CRISP2P16562 243 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 RUSC1-AS1Q66K80 236 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 C7orf69Q9H7B7 122 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 FCN3O75636 299 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 KHDC1LQ5JSQ8 128 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 OR2D3Q8NGH3 330 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 OR1P1Q8NH06 330 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 TMEM18Q96B42 140 aa9.98□□□□□ -0.81
SMARCA4-208ENST00000585799 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 CENPVQ7Z7K6 275 aaPredicted RBP9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 BPIFA4PQ86YQ2 179 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 LSM4Q9Y4Z0 139 aaKnown RBP9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 F11RQ9Y624 299 aaKnown RBP9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 SERTM2A0A1B0GWG4 89 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 PEX7O00628 323 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 SAA4P35542 130 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 VWC2Q2TAL6 325 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 TEX38Q6PEX7 206 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 C19orf24Q9BVV8 132 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 C21orf62Q9NYP8 219 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 EXOC3-AS1Q8N2X6 119 aa9.97□□□□□ -0.81
SMARCA4-208ENST00000585799 TRAV8-1A0A0A6YYK1 113 aa9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 CHEK1O14757 476 aa9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 P01737 135 aa9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 SRP14P37108 136 aaKnown RBP9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 BEND2Q8NDZ0 799 aa9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 ITLN2Q8WWU7 325 aaPredicted RBP9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 BORCS7Q96B45 105 aa9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 PITPNC1Q9UKF7 332 aa9.96□□□□□ -0.81
SMARCA4-208ENST00000585799 IGLC7A0M8Q6 106 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 PF4V1P10720 104 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 COX6B1P14854 86 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 ZFP36P26651 326 aaKnown RBP9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 PRR20EP86478 221 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 PRR20CP86479 221 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 PRR20DP86480 221 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 PRR20BP86481 221 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 PRR20AP86496 221 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 ZNF253O75346 499 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 KRTDAPP60985 99 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 ST6GALNAC6Q969X2 333 aa9.96□□□□□ -0.82
SMARCA4-208ENST00000585799 C5orf52A6NGY3 159 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 A6NNC1 897 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 IGLV1-47P01700 117 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 CDX1P47902 265 aaPredicted RBP9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 FBXL19-AS1Q494R0 122 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 ZNF841Q6ZN19 808 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 MRPL18Q9H0U6 180 aaKnown RBP9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 Q9H3A6 140 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 MUC21A0A0G2JKD1 596 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 MUC21A0A140T8X8 626 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 GGTLC3B5MD39 225 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 IGHV3-11P01762 117 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 CSN3P07498 182 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 MUC21Q5SSG8 566 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 CLEC19AQ6UXS0 136 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 Q8N7P7 452 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 ZZEF1O43149 2961 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 IGFL4Q6B9Z1 124 aa9.95□□□□□ -0.82
SMARCA4-208ENST00000585799 ISLRO14498 428 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 IGLV2-23P01705 113 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 FAM120AOSQ5T036 256 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 CLEC5AQ9NY25 188 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 A0A1B0GUS0 222 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 DLX6P56179 175 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 FAM71F2Q6NXP2 309 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 ZNF600Q6ZNG1 722 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 RNF125Q96EQ8 232 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 SORL1Q92673 2214 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 A0A1W2PPR1 153 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 M0R1W7 72 aa9.94□□□□□ -0.82
SMARCA4-208ENST00000585799 MAS1LP35410 378 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms