RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	TMEM127	O75204	238 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	IGKV1-17	P01599	117 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	RNASE2	P10153	161 aa	Known RBP	6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	HLA-DRB4	P13762	266 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	ZNF182	P17025	639 aa	Predicted RBP	6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	HRH1	P35367	487 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	AKR1C2	P52895	323 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	MLANA	Q16655	118 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	TIGIT	Q495A1	244 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	TMEM69	Q5SWH9	247 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	FAM222A	Q5U5X8	452 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	RNASE11	Q8TAA1	199 aa	Known RBP	6.19	□□□□□ -1.42
NUP85-223	ENST00000583877		Q8WTZ3	238 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	FUNDC2	Q9BWH2	189 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	FNDC4	Q9H6D8	234 aa	Predicted RBP	6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	TMED3	Q9Y3Q3	217 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	HLA-DRB4	X5D2U9	266 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	VPS13B	Q7Z7G8	4022 aa		6.19	□□□□□ -1.42
NUP85-223	ENST00000583877	PGAM2	P15259	253 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	PRSS3	P35030	304 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	ETV6	P41212	452 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	NKX2-1	P43699	371 aa	Predicted RBP	6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	TAS2R20	P59543	309 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	NDUFA5	Q16718	116 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	TMEM88	Q6PEY1	159 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	C15orf53	Q8NAA6	179 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	C7orf50	Q9BRJ6	194 aa	Known RBP	6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	ATG101	Q9BSB4	218 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	NRN1	Q9NPD7	142 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	SCRT2	Q9NQ03	307 aa		6.18	□□□□□ -1.42
NUP85-223	ENST00000583877	SRRM2	Q9UQ35	2752 aa	Known RBP	6.18	□□□□□ -1.42
NUP85-223	ENST00000583877		A0A0B4J293	547 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	RPS10-NUDT3	A0A1W2PQS6	291 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	ATP6V1G1	O75348	118 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	ATG12	O94817	140 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	IGKV1-5	P01602	117 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877		P0C879	139 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	UCP3	P55916	312 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	YPEL3	P61236	119 aa	Predicted RBP	6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	CTF1	Q16619	201 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	BSX	Q3C1V8	233 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	UBE2NL	Q5JXB2	153 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	SIGLEC15	Q6ZMC9	328 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	C6orf223	Q8N319	242 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	OR4B1	Q8NGF8	309 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	OR1S2	Q8NGQ3	325 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	YIPF6	Q96EC8	236 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	MYCBP2	O75592	4640 aa		6.17	□□□□□ -1.42
NUP85-223	ENST00000583877	NBDY	A0A0U1RRE5	68 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	BUB3	O43684	328 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	GSTZ1	O43708	216 aa	Predicted RBP	6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	IL4	P05112	153 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	IGLC1	P0CG04	106 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	DAD1	P61803	113 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	DHODH	Q02127	395 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	USF2	Q15853	346 aa	Predicted RBP	6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	GDF5OS	Q5U4N7	250 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	SAMD12	Q8N8I0	201 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	ZNF709	Q8N972	641 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	DYNC2LI1	Q8TCX1	351 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	RRNAD1	Q96FB5	475 aa	Known RBP	6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	LINC00052	Q96N35	136 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	NAA50	Q9GZZ1	169 aa	Known RBP	6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	SAV1	Q9H4B6	383 aa	Predicted RBP	6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	CCDC59	Q9P031	241 aa	Known RBP	6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	GOLT1B	Q9Y3E0	138 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	FAT1	Q14517	4588 aa		6.16	□□□□□ -1.42
NUP85-223	ENST00000583877	LOC102723971	A0A1B0GUV8	181 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	PTTG1	O95997	202 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	HBE1	P02100	147 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	SLC25A4	P12235	298 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	PI3	P19957	117 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	OR10J1	P30954	320 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	HTR2B	P41595	481 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	RND2	P52198	227 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	DEFA1	P59665	94 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	DEFA3	P59666	94 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	RND3	P61587	244 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	SPCS2	Q15005	226 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	PRSS54	Q6PEW0	395 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	GSG1L	Q6UXU4	331 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	FOXI2	Q6ZQN5	318 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	ZNRF2	Q8NHG8	242 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	COQ8A	Q8NI60	647 aa		6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	HEYL	Q9NQ87	328 aa	Predicted RBP	6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	YTHDF2	Q9Y5A9	579 aa	Known RBP	6.15	□□□□□ -1.42
NUP85-223	ENST00000583877	C3orf85	A0A1B0GTC6	90 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877		M0QYG6	137 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	S100A1	P23297	94 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	S100A5	P33763	92 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	RCVRN	P35243	200 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	ID1	P41134	155 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	PIGP	P57054	158 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	DEFB1	P60022	68 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	ZNF79	Q15937	498 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	RRN3P1	Q2M238	152 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	SP6	Q3SY56	376 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	RNASE12	Q5GAN4	147 aa	Known RBP	6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	SPATA31B1P	Q5VZV4	182 aa		6.14	□□□□□ -1.43
NUP85-223	ENST00000583877	ETFRF1	Q6IPR1	90 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms