RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 PRADC1Q9BSG0 188 aa1.11□□□□□ -2.23
SMCHD1-209ENST00000583441 BCL2L10Q9HD36 194 aa1.11□□□□□ -2.23
SMCHD1-209ENST00000583441 PYCARDQ9ULZ3 195 aa1.11□□□□□ -2.23
SMCHD1-209ENST00000583441 DOCK5Q9H7D0 1870 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 AIPO00170 330 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 HMGB3O15347 200 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 RNASE4P34096 147 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 ATP5G3P48201 142 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 DEFA3P59666 94 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 BASP1P80723 227 aaKnown RBP1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 C1orf137Q5JT78 98 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 C22orf39Q6P5X5 142 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 LINC00301Q8NCQ3 95 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 SLC30A7Q8NEW0 376 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 CANT1Q8WVQ1 401 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 SLAMF6Q96DU3 332 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 ODF3Q96PU9 254 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 STRCQ7RTU9 1775 aa1.1□□□□□ -2.23
SMCHD1-209ENST00000583441 FREM1Q5H8C1 2179 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 BAZ2BQ9UIF8 2168 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 M0R2N4 97 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 GGCTO75223 188 aaKnown RBP1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 NDUFC2O95298 119 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 C1QBP02746 253 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 ZNF93P35789 620 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 SERPINB9P50453 376 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 DYNLT1P63172 113 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 MYL5Q02045 173 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 TAF1AQ15573 450 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 DHRS4L2Q6PKH6 230 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 FAM19A2Q8N3H0 131 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 C3orf56Q8N813 242 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 ZNF418Q8TF45 676 aaPredicted RBP1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 TEX37Q96LM6 180 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 TMEM126AQ9H061 195 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 STOML2Q9UJZ1 356 aa1.09□□□□□ -2.23
SMCHD1-209ENST00000583441 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.24
SMCHD1-209ENST00000583441 MYH11P35749 1972 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 HELZ2Q9BYK8 2649 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 HECW1Q76N89 1606 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 KMT2BQ9UMN6 2715 aaPredicted RBP1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 TRAV3A0A0B4J244 114 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 A8MWV9 139 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 TAX1BP3O14907 124 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 DHFRP00374 187 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 CTAG1AP78358 180 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 SCGB2B2Q4G0G5 96 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 HACD4Q5VWC8 232 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 Q8N814 137 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 STAG3L4Q8TBR4 150 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 GPER1Q99527 375 aa1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 PCF11O94913 1555 aaKnown RBP1.08□□□□□ -2.24
SMCHD1-209ENST00000583441 HEATR5AQ86XA9 2040 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 TRBV6-7A0A0A0MS04 114 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 TRBV6-8A0A0A6YYG3 113 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 NDUFB3O43676 98 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 NCALDP61601 193 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 CNBPP62633 177 aaKnown RBP1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 DEFB115Q30KQ5 88 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 AKR1C8PQ5T2L2 129 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 TMED4Q7Z7H5 227 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 PDZD9Q8IXQ8 264 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 OR2T35Q8NGX2 323 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 TMEM254Q8TBM7 123 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 TMEM70Q9BUB7 260 aa1.07□□□□□ -2.24
SMCHD1-209ENST00000583441 PRRC2BQ5JSZ5 2229 aaKnown RBP1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 DUXBA0A1W2PPF3 345 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 G3V2T6 193 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 INE1O15225 51 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 TIMM17BO60830 172 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 ATG12O94817 140 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 GADD45GO95257 159 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 KRTAP10-4P60372 401 aaPredicted RBP1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 UBE2BP63146 152 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 DEFB113Q30KQ7 82 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 TEX261Q6UWH6 196 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 S100A7AQ86SG5 101 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 SLC25A21Q9BQT8 299 aaPredicted RBP1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 LY96Q9Y6Y9 160 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 U3KQ87 197 aa1.06□□□□□ -2.24
SMCHD1-209ENST00000583441 PCDH15Q96QU1 1955 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 ZNF736B4DX44 427 aaPredicted RBP1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 H7C1C5 153 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 M0R378 163 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 CST8O60676 142 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 PHBP35232 272 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 LCN6P62502 163 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 RPL19P84098 196 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 POU6F1Q14863 301 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 EIF5AL1Q6IS14 154 aaKnown RBP1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 C2orf82Q6UX34 121 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 SOSTDC1Q6X4U4 206 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 SH3BGRL3Q9H299 93 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 LYRM2Q9NU23 88 aaPredicted RBP1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 PRNDQ9UKY0 176 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 LAMB2P55268 1798 aa1.05□□□□□ -2.24
SMCHD1-209ENST00000583441 RIMBP3CA6NJZ7 1639 aa1.04□□□□□ -2.24
SMCHD1-209ENST00000583441 RIMBP3BA6NNM3 1639 aa1.04□□□□□ -2.24
SMCHD1-209ENST00000583441 RIMBP3Q9UFD9 1639 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms