RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SLAMF6Q96DU3 332 aa1.23□□□□□ -2.21
SMARCE1-219ENST00000583294 PRAP1Q96NZ9 151 aa1.23□□□□□ -2.21
SMARCE1-219ENST00000583294 BCL2L10Q9HD36 194 aa1.23□□□□□ -2.21
SMARCE1-219ENST00000583294 CDC42SE1Q9NRR8 79 aa1.23□□□□□ -2.21
SMARCE1-219ENST00000583294 ANP32AP39687 249 aaKnown RBP1.22□□□□□ -2.21
SMARCE1-219ENST00000583294 LINC00526Q96FQ7 95 aa1.22□□□□□ -2.21
SMARCE1-219ENST00000583294 TLNRD1Q9H1K6 362 aa1.22□□□□□ -2.21
SMARCE1-219ENST00000583294 MYH7BA7E2Y1 1941 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 ZNF736B4DX44 427 aaPredicted RBP1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 J3QRK9 145 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 OR7C1O76099 320 aaPredicted RBP1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 GADD45GO95257 159 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 ERP29P30040 261 aaKnown RBP1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 EIF5AP63241 154 aaKnown RBP1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 GDF5OSQ5U4N7 250 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 LYRM7Q5U5X0 104 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 BTF3L4Q96K17 158 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 PRADC1Q9BSG0 188 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 MYH10P35580 1976 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 SCN8AQ9UQD0 1980 aa1.21□□□□□ -2.22
SMARCE1-219ENST00000583294 KIF1BO60333 1816 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 EML5Q05BV3 1969 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 DYNLT1P63172 113 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 LIN52Q52LA3 116 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 SLC30A7Q8NEW0 376 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 STAG3L4Q8TBR4 150 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 TEX47Q8TBZ9 253 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 TMEM133Q9H2Q1 129 aa1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 FAM32AQ9Y421 112 aaKnown RBP1.2□□□□□ -2.22
SMARCE1-219ENST00000583294 MCM3APO60318 1980 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 SNRNP200O75643 2136 aaKnown RBP1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 NOTCH1P46531 2555 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 RIMBP3CA6NJZ7 1639 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 RIMBP3BA6NNM3 1639 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 RIMBP3Q9UFD9 1639 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 M0R2N4 97 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 OBSL1O75147 1896 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 ZNF25P17030 456 aaPredicted RBP1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 RNASE4P34096 147 aaKnown RBP1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 SRP14P37108 136 aaKnown RBP1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 PIGPP57054 158 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 ERVS71-1P61550 626 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 GNPDA2Q8TDQ7 276 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 DGCR14Q96DF8 476 aaKnown RBP1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 NMNAT1Q9HAN9 279 aaPredicted RBP1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 C14orf132Q9NPU4 83 aa1.19□□□□□ -2.22
SMARCE1-219ENST00000583294 CTXN2P0C2S0 81 aa1.18□□□□□ -2.22
SMARCE1-219ENST00000583294 SOSTDC1Q6X4U4 206 aa1.18□□□□□ -2.22
SMARCE1-219ENST00000583294 RNF122Q9H9V4 155 aa1.18□□□□□ -2.22
SMARCE1-219ENST00000583294 ENY2Q9NPA8 101 aa1.18□□□□□ -2.22
SMARCE1-219ENST00000583294 ZNF469Q96JG9 3925 aaPredicted RBP1.18□□□□□ -2.22
SMARCE1-219ENST00000583294 ARHGEF28Q8N1W1 1705 aaKnown RBP1.18□□□□□ -2.22
SMARCE1-219ENST00000583294 LAMB4A4D0S4 1761 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 TRAV4A0A0B4J268 109 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 INE1O15225 51 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 TIMM17BO60830 172 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 E2F6O75461 281 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 S100A6P06703 90 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 KRR1Q13601 381 aaKnown RBP1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 MPV17LQ2QL34 196 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 Q8IYB0 196 aa1.17□□□□□ -2.22
SMARCE1-219ENST00000583294 FBN2P35556 2912 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 FAM159BA6NKW6 160 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 DNAL4O96015 105 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 ATP5G3P48201 142 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 REEP5Q00765 189 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 FADDQ13158 208 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 OR11H6Q8NGC7 330 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 C4orf3Q8WVX3 66 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 BORCS5Q969J3 196 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 HEATR1Q9H583 2144 aaKnown RBP1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
SMARCE1-219ENST00000583294 IFNA6P05013 189 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 SPRNQ5BIV9 151 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 S100A7AQ86SG5 101 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 PDZD9Q8IXQ8 264 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 OR2T35Q8NGX2 323 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 ITFG2Q969R8 447 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 ARL2BPQ9Y2Y0 163 aa1.15□□□□□ -2.23
SMARCE1-219ENST00000583294 ADGRB2O60241 1585 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 HMGB3O15347 200 aaKnown RBP1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 SERPINA1P01009 418 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 RRN3P1Q2M238 152 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 FAM74A1Q5RGS3 127 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 C9orf16Q9BUW7 83 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 PARVBQ9HBI1 364 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 OPTCQ9UBM4 332 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 FMN1Q68DA7 1419 aa1.14□□□□□ -2.23
SMARCE1-219ENST00000583294 PCF11O94913 1555 aaKnown RBP1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 TRBV19A0A075B6N1 114 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 NDUFB3O43676 98 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 CST8O60676 142 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 DHFRP00374 187 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 GOLT1AQ6ZVE7 132 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 ST6GALNAC3Q8NDV1 305 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 TMEM126AQ9H061 195 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 TAS2R7Q9NYW3 318 aa1.13□□□□□ -2.23
SMARCE1-219ENST00000583294 CASP8AP2Q9UKL3 1982 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms