RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SYNGR2O43760 224 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 RPP30P78346 268 aaKnown RBP9.92□□□□□ -0.82
SS18-222ENST00000582792 GSG1LQ6UXU4 331 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 UBAC2Q8NBM4 344 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 SLC24A4Q8NFF2 622 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 RNASEH2CQ8TDP1 164 aaKnown RBP9.92□□□□□ -0.82
SS18-222ENST00000582792 ZNF414Q96IQ9 312 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 RHPN1-AS1Q9BWJ2 59 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 APLNQ9ULZ1 77 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
SS18-222ENST00000582792 IGHV7-4-1A0A0J9YVY3 117 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 CTSGP08311 255 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 NPY1RP25929 384 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 TFPI2P48307 235 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 TAS2R30P59541 319 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 Q56UQ5 140 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
SS18-222ENST00000582792 RPS10-NUDT3A0A1W2PQS6 291 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 C5orf51A6NDU8 294 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 DEFB4AO15263 64 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 NXPH3O95157 252 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 MT-CO2P00403 227 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 MFAP4P55083 255 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 RELQ04864 619 aaPredicted RBP9.9□□□□□ -0.82
SS18-222ENST00000582792 IL15RAQ13261 267 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 FAM90A2PQ658T7 463 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 MISP3Q96FF7 219 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 SMIM8Q96KF7 97 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 RAB40CQ96S21 281 aa9.9□□□□□ -0.82
SS18-222ENST00000582792 DNAH2Q9P225 4427 aa9.9□□□□□ -0.83
SS18-222ENST00000582792 IGKV3-7A0A075B6H7 116 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 IGHV3-49A0A0A0MS15 119 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 FAM25EA8MYX2 175 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 IGLL5B9A064 214 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 C11orf94C9JXX5 98 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 WRBO00258 174 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 CCSO14618 274 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 NUPL2O15504 423 aaKnown RBP9.89□□□□□ -0.83
SS18-222ENST00000582792 SSNA1O43805 119 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 CA1P00915 261 aaPredicted RBP9.89□□□□□ -0.83
SS18-222ENST00000582792 IFNA10P01566 189 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 GPX4P36969 197 aaPredicted RBP9.89□□□□□ -0.83
SS18-222ENST00000582792 NPBWR1P48145 328 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 POLR2GP62487 172 aaKnown RBP eCLIP9.89□□□□□ -0.83
SS18-222ENST00000582792 RAB11AP62491 216 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 CYCSP99999 105 aaKnown RBP9.89□□□□□ -0.83
SS18-222ENST00000582792 ETFRF1Q6IPR1 90 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 GBGT1Q8N5D6 347 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 TMEM170AQ8WVE7 144 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 NMES1Q9C002 83 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 GSKIPQ9P0R6 139 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 ALG5Q9Y673 324 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 DNAH17Q9UFH2 4485 aa9.89□□□□□ -0.83
SS18-222ENST00000582792 TRAV14DV4A0A0A6YYC5 116 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 YIF1AO95070 293 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 MBPP02686 304 aaPredicted RBP9.88□□□□□ -0.83
SS18-222ENST00000582792 IAPPP10997 89 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 SLC25A4P12235 298 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 LINC00336Q6ZUF6 198 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 MAGT1Q9H0U3 335 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 HRH4Q9H3N8 390 aa9.88□□□□□ -0.83
SS18-222ENST00000582792 STRAPQ9Y3F4 350 aaKnown RBP9.88□□□□□ -0.83
SS18-222ENST00000582792 K7EPK0 472 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 GOSR2O14653 212 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 TSC22D2O75157 780 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 OPRK1P41145 380 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 PAFAH1B2P68402 229 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 TCF24Q7RTU0 167 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 Q8NAQ8 132 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 OR4X1Q8NH49 305 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 PINX1Q96BK5 328 aaKnown RBP9.87□□□□□ -0.83
SS18-222ENST00000582792 FNDC4Q9H6D8 234 aaPredicted RBP9.87□□□□□ -0.83
SS18-222ENST00000582792 PSENENQ9NZ42 101 aa9.87□□□□□ -0.83
SS18-222ENST00000582792 RCL1Q9Y2P8 373 aaKnown RBP9.87□□□□□ -0.83
SS18-222ENST00000582792 IGHV3OR16-13A0A075B7E8 117 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 TRAV30A0A087WSZ9 112 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 IGHV3-74A0A0B4J1X5 117 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 SSSCA1O60232 199 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 CLN5O75503 358 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 SCGB2A1O75556 95 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 DFFBO76075 338 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 SCGB1D2O95969 90 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 CD5P06127 495 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 PVALBP20472 110 aaPredicted RBP9.86□□□□□ -0.83
SS18-222ENST00000582792 PAX9P55771 341 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 TMEM14EPQ6UXP3 125 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 ASB13Q8WXK3 278 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 C11orf1Q9H5F2 150 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 MGAT4CQ9UBM8 478 aa9.86□□□□□ -0.83
SS18-222ENST00000582792 A0A1B0GVY2 172 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 TMEM50AO95807 157 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 DEFB131AP59861 70 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 SPANXN5Q5MJ07 72 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 LEMD1Q68G75 181 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 GINS3Q9BRX5 216 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 MED28Q9H204 178 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 MS4A6AQ9H2W1 248 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 VSIRQ9H7M9 311 aa9.85□□□□□ -0.83
SS18-222ENST00000582792 DYNC1H1Q14204 4646 aaKnown RBP9.84□□□□□ -0.83
SS18-222ENST00000582792 PKD1P98161 4303 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms