RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 OR5T1Q8NG75 326 aa17.94■□□□□ 0.46
CCDC47-204ENST00000582252 IGLC1P0CG04 106 aa17.93■□□□□ 0.46
CCDC47-204ENST00000582252 BTF3L4Q96K17 158 aa17.93■□□□□ 0.46
CCDC47-204ENST00000582252 SSX3Q99909 188 aa17.93■□□□□ 0.46
CCDC47-204ENST00000582252 TRAV5A0A0B4J249 113 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 SMUG1Q53HV7 270 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 TTC9CQ8N5M4 171 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 RBM14Q96PK6 669 aaKnown RBP17.92■□□□□ 0.46
CCDC47-204ENST00000582252 TCEAL7Q9BRU2 100 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 PFN1P07737 140 aaKnown RBP17.92■□□□□ 0.46
CCDC47-204ENST00000582252 PAX8Q06710 450 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 MORN5Q5VZ52 161 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 FAM103A1Q9BTL3 118 aaKnown RBP17.92■□□□□ 0.46
CCDC47-204ENST00000582252 THYN1Q9P016 225 aa17.92■□□□□ 0.46
CCDC47-204ENST00000582252 TRAV30A0A087WSZ9 112 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 HELTA6NFD8 242 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 K7EIM0 57 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 RPL35P42766 123 aaKnown RBP17.91■□□□□ 0.46
CCDC47-204ENST00000582252 SUMO1P63165 101 aaKnown RBP17.91■□□□□ 0.46
CCDC47-204ENST00000582252 Q5PR19 223 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 RUSC1-AS1Q66K80 236 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 PRSS57Q6UWY2 283 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 IMMP2LQ96T52 175 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 HIGD1AQ9Y241 93 aa17.91■□□□□ 0.46
CCDC47-204ENST00000582252 GGTLC3B5MD39 225 aa17.9■□□□□ 0.46
CCDC47-204ENST00000582252 HLA-DRB1P01911 266 aa17.9■□□□□ 0.46
CCDC47-204ENST00000582252 CRYBB3P26998 211 aa17.9■□□□□ 0.46
CCDC47-204ENST00000582252 SFRP2Q96HF1 295 aa17.9■□□□□ 0.46
CCDC47-204ENST00000582252 PYGO2Q9BRQ0 406 aa17.9■□□□□ 0.46
CCDC47-204ENST00000582252 TRBV20OR9-2A0A075B6H5 130 aa17.89■□□□□ 0.46
CCDC47-204ENST00000582252 SCGB2A1O75556 95 aa17.89■□□□□ 0.46
CCDC47-204ENST00000582252 FBLN7Q53RD9 439 aa17.89■□□□□ 0.46
CCDC47-204ENST00000582252 Q8N9W7 124 aa17.89■□□□□ 0.46
CCDC47-204ENST00000582252 NECAP1Q8NC96 275 aa17.89■□□□□ 0.46
CCDC47-204ENST00000582252 AJUBAQ96IF1 538 aa17.89■□□□□ 0.46
CCDC47-204ENST00000582252 PRRC2AP48634 2157 aaKnown RBP17.89■□□□□ 0.45
CCDC47-204ENST00000582252 CENPVL3A0A0U1RRI6 287 aa17.89■□□□□ 0.45
CCDC47-204ENST00000582252 PSG1P11464 419 aa17.89■□□□□ 0.45
CCDC47-204ENST00000582252 GNG4P50150 75 aa17.89■□□□□ 0.45
CCDC47-204ENST00000582252 S100A7AQ86SG5 101 aa17.89■□□□□ 0.45
CCDC47-204ENST00000582252 FXYD5Q96DB9 178 aa17.89■□□□□ 0.45
CCDC47-204ENST00000582252 ZNF48Q96MX3 618 aaPredicted RBP17.89■□□□□ 0.45
CCDC47-204ENST00000582252 CSMD1Q96PZ7 3565 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 IGLV11-55A0A075B6I3 123 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 C5orf52A6NGY3 159 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 PYYP10082 97 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 MFAP4P55083 255 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 LYZP61626 148 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 TIGITQ495A1 244 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 OCC1Q8TAD7 63 aa17.88■□□□□ 0.45
CCDC47-204ENST00000582252 RD3LP0DJH9 198 aa17.87■□□□□ 0.45
CCDC47-204ENST00000582252 SNRPEP62304 92 aaKnown RBP17.87■□□□□ 0.45
CCDC47-204ENST00000582252 SRD5A3Q9H8P0 318 aa17.87■□□□□ 0.45
CCDC47-204ENST00000582252 IGHV7-81A0A0B4J1V7 117 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 AP4M1O00189 453 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 HIST1H1BP16401 226 aaKnown RBP17.86■□□□□ 0.45
CCDC47-204ENST00000582252 ASPHD1Q5U4P2 390 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 OR10G8Q8NGN5 311 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 GSX1Q9H4S2 264 aaPredicted RBP17.86■□□□□ 0.45
CCDC47-204ENST00000582252 PDZD2O15018 2839 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 PGPEP1LA6NFU8 196 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 PPP5D1E7EU14 171 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 GGCTO75223 188 aaKnown RBP17.86■□□□□ 0.45
CCDC47-204ENST00000582252 TOMM40O96008 361 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 TAS2R60P59551 318 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 NDPQ00604 133 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 CENPWQ5EE01 88 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 FAM120AOSQ5T036 256 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 ELOVL1Q9BW60 279 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 AURKAIP1Q9NWT8 199 aaPredicted RBP17.86■□□□□ 0.45
CCDC47-204ENST00000582252 CR1P17927 2039 aa17.86■□□□□ 0.45
CCDC47-204ENST00000582252 A0A096LNT2 108 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 IGHV1-69DA0A0B4J2H0 117 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 UBE2CO00762 179 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 GNG7O60262 68 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 IGHV1-69P01742 117 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 AKR1D1P51857 326 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 CNN1P51911 297 aaKnown RBP17.85■□□□□ 0.45
CCDC47-204ENST00000582252 TEX38Q6PEX7 206 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 TMEM190Q8WZ59 177 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 FANCD2OSQ96PS1 177 aa17.85■□□□□ 0.45
CCDC47-204ENST00000582252 A0A1W2PPQ1 181 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 IGKV1-17P01599 117 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 TMEM68Q96MH6 324 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 ITPR3Q14573 2671 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 TRGC2P03986 189 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 FAM3BP58499 235 aaPredicted RBP17.84■□□□□ 0.45
CCDC47-204ENST00000582252 YPEL3P61236 119 aaPredicted RBP17.84■□□□□ 0.45
CCDC47-204ENST00000582252 LOXL1Q08397 574 aaPredicted RBP17.84■□□□□ 0.45
CCDC47-204ENST00000582252 FOXL1Q12952 345 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 ZNF329Q86UD4 541 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 TMEM14CQ9P0S9 112 aa17.84■□□□□ 0.45
CCDC47-204ENST00000582252 B4DSR2 109 aa17.83■□□□□ 0.44
CCDC47-204ENST00000582252 NBEAP1P0C6P0 100 aa17.83■□□□□ 0.44
CCDC47-204ENST00000582252 HNF1AP20823 631 aa17.83■□□□□ 0.44
CCDC47-204ENST00000582252 SGMS2Q8NHU3 365 aa17.83■□□□□ 0.44
CCDC47-204ENST00000582252 FAM110DQ8TAY7 271 aaPredicted RBP17.83■□□□□ 0.44
CCDC47-204ENST00000582252 SLC25A39Q9BZJ4 359 aaPredicted RBP17.83■□□□□ 0.44
CCDC47-204ENST00000582252 MRPL27Q9P0M9 148 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms