RNA–Protein interactions for RNA: ENST00000581963.1

CDK12-207, Transcript of cyclin dependent kinase 12, humanhuman

TSL 3

Gene CDK12, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-207ENST00000581963 LINC00052Q96N35 136 aa4.29□□□□□ -1.72
CDK12-207ENST00000581963 C7orf50Q9BRJ6 194 aaKnown RBP4.29□□□□□ -1.72
CDK12-207ENST00000581963 PDCD10Q9BUL8 212 aa4.29□□□□□ -1.72
CDK12-207ENST00000581963 SCPEP1Q9HB40 452 aa4.29□□□□□ -1.72
CDK12-207ENST00000581963 ENY2Q9NPA8 101 aa4.29□□□□□ -1.72
CDK12-207ENST00000581963 GOLT1BQ9Y3E0 138 aa4.29□□□□□ -1.72
CDK12-207ENST00000581963 LINC00588Q9Y4M8 146 aa4.29□□□□□ -1.72
CDK12-207ENST00000581963 UBR4Q5T4S7 5183 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 A0A0J9YX75 114 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 C3orf85A0A1B0GTC6 90 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 PLAC8L1A1L4L8 177 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 A8MTW9 85 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 M0QYG6 137 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 NUDT3O95989 172 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 RD3LP0DJH9 198 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 PSG1P11464 419 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 PGAM2P15259 253 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 UCP1P25874 307 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 RCVRNP35243 200 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 RPS19P39019 145 aaKnown RBP4.28□□□□□ -1.72
CDK12-207ENST00000581963 HTR2BP41595 481 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 PSMB3P49720 205 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 PIGPP57054 158 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 SPCS3P61009 180 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 SP6Q3SY56 376 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 LINC01559Q495D7 138 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 AMTNQ6UX39 209 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 LHFPL1Q86WI0 220 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 SLC24A4Q8NFF2 622 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 OR51G1Q8NGK1 321 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 OR52E5Q8NH55 327 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 LHFPL5Q8TAF8 219 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 RNASEH2CQ8TDP1 164 aaKnown RBP4.28□□□□□ -1.72
CDK12-207ENST00000581963 NPIPB3Q92617 1050 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 RNF125Q96EQ8 232 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 ZNF486Q96H40 463 aaPredicted RBP4.28□□□□□ -1.72
CDK12-207ENST00000581963 ACY3Q96HD9 319 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 MAGT1Q9H0U3 335 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 HEYLQ9NQ87 328 aaPredicted RBP4.28□□□□□ -1.72
CDK12-207ENST00000581963 KLK11Q9UBX7 282 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 RAB26Q9ULW5 256 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
CDK12-207ENST00000581963 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 A6NJY4 79 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 LYRM9A8MSI8 78 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 F5H768 121 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 ISLRO14498 428 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 CRXO43186 299 aaPredicted RBP4.27□□□□□ -1.73
CDK12-207ENST00000581963 ATG12O94817 140 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 INAFM2P0DMQ5 153 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 DEFB130BP0DP73 79 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 DEFB130AP0DP74 79 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 ID1P41134 155 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 CCL18P55774 89 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 SUPT4H1P63272 117 aaKnown RBP4.27□□□□□ -1.73
CDK12-207ENST00000581963 TRIM16LQ309B1 348 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 SPATA31B1PQ5VZV4 182 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 SNX29P2Q8IUI4 249 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 CROCCP3Q8IVE0 287 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 COQ8AQ8NI60 647 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 RNF141Q8WVD5 230 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 RRNAD1Q96FB5 475 aaKnown RBP4.27□□□□□ -1.73
CDK12-207ENST00000581963 C20orf173Q96LM9 149 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 IGF2BP2-AS1Q96M15 143 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 C17orf77Q96MU5 243 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 PBDC1Q9BVG4 233 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 VCX3BQ9H321 246 aa4.27□□□□□ -1.73
CDK12-207ENST00000581963 IGKV1D-37A0A075B6S9 117 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 CEBPZOSA8MTT3 80 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 ZNF705GA8MUZ8 300 aaPredicted RBP4.26□□□□□ -1.73
CDK12-207ENST00000581963 M0R2Z0 102 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 CDS2O95674 445 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 ATP5G1P05496 136 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 AZU1P20160 251 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 BTF3P20290 206 aaKnown RBP4.26□□□□□ -1.73
CDK12-207ENST00000581963 NUP62P37198 522 aaPredicted RBP4.26□□□□□ -1.73
CDK12-207ENST00000581963 ATP5G3P48201 142 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 ZNF90Q03938 601 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 MEF2DQ14814 521 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 FCN2Q15485 313 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 NEDD8Q15843 81 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 RNASE12Q5GAN4 147 aaKnown RBP4.26□□□□□ -1.73
CDK12-207ENST00000581963 NMSQ5H8A3 153 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 OR8G2PQ6IF36 304 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 ETFRF1Q6IPR1 90 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 EBLN2Q6P2I7 272 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 SSX7Q7RTT5 188 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 FAM219AQ8IW50 185 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 ARRDC1Q8N5I2 433 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 OR11H7Q8NGC8 314 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 OR13C8Q8NGS7 320 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 RNASE11Q8TAA1 199 aaKnown RBP4.26□□□□□ -1.73
CDK12-207ENST00000581963 GLYATL2Q8WU03 294 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 TMEM208Q9BTX3 173 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 TMEM222Q9H0R3 208 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 Q9H3A6 140 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 Q9H8V8 135 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 RPRMQ9NS64 109 aa4.26□□□□□ -1.73
CDK12-207ENST00000581963 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms