RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 RLN2P04090 185 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 IAPPP10997 89 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 SLC25A4P12235 298 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 CD300CQ08708 224 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 KIR2DL5AQ8N109 375 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 KIR2DL5BQ8NHK3 375 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 HEYLQ9NQ87 328 aaPredicted RBP15.52■□□□□ 0.08
CCDC42-203ENST00000581598 MBD2Q9UBB5 411 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 UBQLN2Q9UHD9 624 aa15.52■□□□□ 0.08
CCDC42-203ENST00000581598 IGHV3OR16-8A0A075B7F1 116 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 E5RGE8 158 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 SMLR1H3BR10 107 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 CHEK1O14757 476 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 ZNF207O43670 478 aaKnown RBP15.51■□□□□ 0.07
CCDC42-203ENST00000581598 TSC22D2O75157 780 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 PVALBP20472 110 aaPredicted RBP15.51■□□□□ 0.07
CCDC42-203ENST00000581598 PVRIGQ6DKI7 326 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 RHPN1-AS1Q9BWJ2 59 aa15.51■□□□□ 0.07
CCDC42-203ENST00000581598 L7N2F9 121 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 GNG7O60262 68 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 RNASE2P10153 161 aaKnown RBP15.5■□□□□ 0.07
CCDC42-203ENST00000581598 HTR2BP41595 481 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 ATP5IP56385 69 aaPredicted RBP15.5■□□□□ 0.07
CCDC42-203ENST00000581598 VAMP2P63027 116 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 TMEM116Q8NCL8 245 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 THAP6Q8TBB0 222 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 RNF2Q99496 336 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 PSENENQ9NZ42 101 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 U3KQ87 197 aa15.5■□□□□ 0.07
CCDC42-203ENST00000581598 BMI1P35226 326 aa15.49■□□□□ 0.07
CCDC42-203ENST00000581598 CMC4P56277 68 aaPredicted RBP15.49■□□□□ 0.07
CCDC42-203ENST00000581598 SLC24A4Q8NFF2 622 aa15.49■□□□□ 0.07
CCDC42-203ENST00000581598 TMEM170AQ8WVE7 144 aa15.49■□□□□ 0.07
CCDC42-203ENST00000581598 PINX1Q96BK5 328 aaKnown RBP15.49■□□□□ 0.07
CCDC42-203ENST00000581598 LYRM2Q9NU23 88 aaPredicted RBP15.49■□□□□ 0.07
CCDC42-203ENST00000581598 CORTO00230 105 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 SPRY2O43597 315 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 PFDN1O60925 122 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 YIF1AO95070 293 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 C1QBP02746 253 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 CD5P06127 495 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 SNCAP37840 140 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 P2RY1P47900 373 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 NPBWR1P48145 328 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 C2orf83Q53S99 150 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 FAM90A2PQ658T7 463 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 TMEM14EPQ6UXP3 125 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 GINS3Q9BRX5 216 aa15.48■□□□□ 0.07
CCDC42-203ENST00000581598 ATF4P18848 351 aaPredicted RBP15.47■□□□□ 0.07
CCDC42-203ENST00000581598 NPY1RP25929 384 aa15.47■□□□□ 0.07
CCDC42-203ENST00000581598 SPANXN5Q5MJ07 72 aa15.47■□□□□ 0.07
CCDC42-203ENST00000581598 STPG3Q8N7X2 389 aa15.47■□□□□ 0.07
CCDC42-203ENST00000581598 OR11H4Q8NGC9 324 aa15.47■□□□□ 0.07
CCDC42-203ENST00000581598 RNF183Q96D59 192 aa15.47■□□□□ 0.07
CCDC42-203ENST00000581598 STRAPQ9Y3F4 350 aaKnown RBP15.47■□□□□ 0.07
CCDC42-203ENST00000581598 H3BP45 60 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 IFNA10P01566 189 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 IGHV3-48P01763 117 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 SUB1P53999 127 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCDC42-203ENST00000581598 RPP30P78346 268 aaKnown RBP15.46■□□□□ 0.07
CCDC42-203ENST00000581598 TOMM20LQ6UXN7 152 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 NOXA1Q86UR1 476 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 TMEM252Q8N6L7 170 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 VSIRQ9H7M9 311 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 MAP6D1Q9H9H5 199 aa15.46■□□□□ 0.07
CCDC42-203ENST00000581598 FXYD6-FXYD2A0A087WZ82 144 aa15.45■□□□□ 0.06
CCDC42-203ENST00000581598 IGSF23A1L1A6 192 aa15.45■□□□□ 0.06
CCDC42-203ENST00000581598 FAM24AA6NFZ4 105 aa15.45■□□□□ 0.06
CCDC42-203ENST00000581598 DEFB135Q30KP9 77 aa15.45■□□□□ 0.06
CCDC42-203ENST00000581598 ZNF600Q6ZNG1 722 aa15.45■□□□□ 0.06
CCDC42-203ENST00000581598 TNFSF18Q9UNG2 199 aa15.45■□□□□ 0.06
CCDC42-203ENST00000581598 PMS2P5A8MQ11 134 aa15.44■□□□□ 0.06
CCDC42-203ENST00000581598 HMSDA8MTL9 139 aa15.44■□□□□ 0.06
CCDC42-203ENST00000581598 CAV2P51636 162 aa15.44■□□□□ 0.06
CCDC42-203ENST00000581598 ZNF546Q86UE3 836 aa15.44■□□□□ 0.06
CCDC42-203ENST00000581598 AQP10Q96PS8 301 aa15.44■□□□□ 0.06
CCDC42-203ENST00000581598 ZFAND3Q9H8U3 227 aa15.44■□□□□ 0.06
CCDC42-203ENST00000581598 PLECQ15149 4684 aaKnown RBP15.43■□□□□ 0.06
CCDC42-203ENST00000581598 IGHV3-49A0A0A0MS15 119 aa15.43■□□□□ 0.06
CCDC42-203ENST00000581598 A0A0J9YWU9 116 aa15.43■□□□□ 0.06
CCDC42-203ENST00000581598 PRSS46E5RG02 174 aa15.43■□□□□ 0.06
CCDC42-203ENST00000581598 RAB11AP62491 216 aa15.43■□□□□ 0.06
CCDC42-203ENST00000581598 PAFAH1B2P68402 229 aa15.43■□□□□ 0.06
CCDC42-203ENST00000581598 RNASEH2CQ8TDP1 164 aaKnown RBP15.43■□□□□ 0.06
CCDC42-203ENST00000581598 SLC25A31Q9H0C2 315 aa15.43■□□□□ 0.06
CCDC42-203ENST00000581598 PUS1Q9Y606 427 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC42-203ENST00000581598 TRAV2A0A0B4J234 112 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 RNF222A6NCQ9 220 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 METTL15P1P0C7V9 234 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 RPL35AP18077 110 aaKnown RBP15.42■□□□□ 0.06
CCDC42-203ENST00000581598 RPL12P30050 165 aaKnown RBP15.42■□□□□ 0.06
CCDC42-203ENST00000581598 SULT1A1P50225 295 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 EWSR1Q01844 656 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCDC42-203ENST00000581598 BAXQ07812 192 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 ZFP69Q49AA0 526 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 TCF24Q7RTU0 167 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 APRG1Q8IVJ8 170 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 HYLS1Q96M11 299 aa15.42■□□□□ 0.06
CCDC42-203ENST00000581598 CLN5O75503 358 aa15.41■□□□□ 0.06
CCDC42-203ENST00000581598 ARL16Q0P5N6 197 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms