RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 BRCA2P51587 3418 aa1.52□□□□□ -2.17
SMCHD1-205ENST00000581383 RFX7Q2KHR2 1363 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 IRGMA1A4Y4 181 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 SMIM23A6NLE4 172 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 FABP5P3A8MUU1 101 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 PSMD12O00232 456 aaPredicted RBP1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 IFNA16P05015 189 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 RPS4Y1P22090 263 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 SULT1A1P50225 295 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 SUPT4H1P63272 117 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 CCL20P78556 96 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 ELOBQ15370 118 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 NDUFA5Q16718 116 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 IMPG1Q17R60 797 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 Q1T7F1 81 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 AADACL3Q5VUY0 350 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 SYPL2Q5VXT5 272 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 C9orf163Q8N9P6 203 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 PPP1R14BQ96C90 147 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 IMP4Q96G21 291 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 UCK1Q9HA47 277 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 PKIGQ9Y2B9 76 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 SPEF2Q9C093 1822 aa1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 MKI67P46013 3256 aaKnown RBP1.51□□□□□ -2.17
SMCHD1-205ENST00000581383 IBA57-AS1B1ANH7 110 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 F8W036 122 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 RPS17P08708 135 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 CD79AP11912 226 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 NFYAP23511 347 aaPredicted RBP1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 KISS1Q15726 138 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 IBA57Q5T440 356 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 OR8B3Q8NGG8 313 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 MRPL30Q8TCC3 161 aaKnown RBP1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 ITFG2Q969R8 447 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 PPP1R2P1Q96PQ5 205 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 OR52E6Q96RD3 313 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 DERL1Q9BUN8 251 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 DLG5Q8TDM6 1919 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 NUP98P52948 1817 aa1.5□□□□□ -2.17
SMCHD1-205ENST00000581383 CHP2O43745 196 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HLA-DRB1P01911 266 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 RPSAP08865 295 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 UBBP0CG47 229 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BOP23527 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BBP33778 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 CDKN2CP42773 168 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 FXYD2P54710 66 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BDP58876 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 SNRPD2P62316 118 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BCP62807 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST2H2BEQ16778 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 DHFR2Q86XF0 187 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 C20orf196Q8IYI0 205 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 MCFD2Q8NI22 146 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BHQ93079 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 C8orf76Q96K31 380 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 CCDC42Q96M95 316 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BNQ99877 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H2BMQ99879 126 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 TP73-AS1Q9UF72 201 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 BAIAP2Q9UQB8 552 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 LAMA3Q16787 3333 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 A0A1B0GUL6 1792 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 RANBP2P49792 3224 aaKnown RBP1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 ARAP2Q8WZ64 1704 aa1.49□□□□□ -2.17
SMCHD1-205ENST00000581383 A0A0C4DFX4 3053 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 DOCK5Q9H7D0 1870 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 SZT2Q5T011 3432 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 HEATR5BQ9P2D3 2071 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 IGKV1D-43A0A0B4J1Z2 117 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 TRAPPC13A5PLN9 417 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 SDCBPO00560 298 aaPredicted RBP1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 IGKV1-5P01602 117 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 SERPINA6P08185 405 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 RPL5P46777 297 aaKnown RBP1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 DEFA1P59665 94 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 PSME3P61289 254 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 KCNJ8Q15842 424 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 RGS21Q2M5E4 152 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 DEFB123Q8N688 67 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 FBXL12Q9NXK8 326 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 VPS29Q9UBQ0 182 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 CENPFP49454 3210 aa1.48□□□□□ -2.17
SMCHD1-205ENST00000581383 MYOFQ9NZM1 2061 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 SPTBN5Q9NRC6 3674 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 CACNA1AO00555 2505 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 NCOR1O75376 2440 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 CASP8AP2Q9UKL3 1982 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 INTS1Q8N201 2190 aaKnown RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 FAAHO00519 579 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 PMP2P02689 132 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 METTL15P1P0C7V9 234 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 LYNX1P0DP58 116 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 HIST1H1TP22492 207 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 ZNF80P51504 273 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 HBA1P69905 142 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 ZNF345Q14585 488 aa1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 ACOT6Q3I5F7 207 aaPredicted RBP1.47□□□□□ -2.17
SMCHD1-205ENST00000581383 RPL22L1Q6P5R6 122 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms