RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 RPUSD1Q9UJJ7 312 aaKnown RBP11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 PCDH15Q96QU1 1955 aa11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 SH2D7A6NKC9 451 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 TYMSP04818 313 aa11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 C16orf92Q96LL3 132 aa11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 FGF23Q9GZV9 251 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 CHODLQ9H9P2 273 aa11.15□□□□□ -0.62
TRAPPC8-207ENST00000580104 A0A087X0K7 114 aa11.15□□□□□ -0.63
TRAPPC8-207ENST00000580104 SPCS1Q9Y6A9 102 aa11.15□□□□□ -0.63
TRAPPC8-207ENST00000580104 CACNG7P62955 275 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 GTF3C1Q12789 2109 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 LYNX1G3V0Z9 82 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 SMIM13P0DJ93 91 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 LYNX1P0DP58 116 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 RIPPLY3P57055 190 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 C20orf144Q9BQM9 153 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 SOX21Q9Y651 276 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 C17orf100A8MU93 164 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 IGHV1-46P01743 117 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 PPIFP30405 207 aaKnown RBP11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 LY6G6EA0A0G2JKS1 128 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 U3KQA8 63 aa11.14□□□□□ -0.63
TRAPPC8-207ENST00000580104 HERVK_113P61574 105 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 FOXC2Q99958 501 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 SCRT1Q9BWW7 348 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.13□□□□□ -0.639e-7■■■■□ 20.5
TRAPPC8-207ENST00000580104 NUPR1O60356 82 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 PSG9Q00887 426 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 CCL21O00585 134 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 OR1N2Q8NGR9 330 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 MEGF9Q9H1U4 602 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 ZNF257Q9Y2Q1 563 aa11.13□□□□□ -0.63
TRAPPC8-207ENST00000580104 M0R3E3 92 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 SAPCD1Q5SSQ6 148 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 LYRM7Q5U5X0 104 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 OTORQ9NRC9 128 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 Q0VG73 95 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 PPP1R27Q86WC6 154 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 DLX1P56177 255 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 RPS20P60866 119 aaKnown RBP11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 PSG8Q9UQ74 426 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 LY96Q9Y6Y9 160 aa11.12□□□□□ -0.63
TRAPPC8-207ENST00000580104 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 TDRG1Q3Y452 100 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 SFTA2Q6UW10 78 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 ST20Q9HBF5 79 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 LSM4Q9Y4Z0 139 aaKnown RBP11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 C18orf32Q8TCD1 76 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 MED13Q9UHV7 2174 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 YPEL3P61236 119 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 SRSF6Q13247 344 aaKnown RBP11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 UBE2V1Q13404 147 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 FER1L6-AS1Q8NA97 138 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 SMIM12Q96EX1 92 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 LOXL3P58215 753 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 KIAA1549LQ6ZVL6 1849 aa11.11□□□□□ -0.63
TRAPPC8-207ENST00000580104 GGTLC3B5MD39 225 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 SLAQ13239 276 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 METTL26Q96S19 204 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 PHLDA3Q9Y5J5 127 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 M0R381 172 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 RNASE2P10153 161 aaKnown RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 PSG1P11464 419 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 Q6ZR03 302 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 Q6ZVH6 145 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 V9GYV3 84 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 ERVK11-1P61568 191 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 HIST1H1AQ02539 215 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 DUX4L9Q6RFH8 374 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 SYS1-DBNDD2H3BUS1 97 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 NCR2O95944 276 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 TCRAP04437 139 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 RPL13AP40429 203 aaKnown RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 VDAC2P45880 294 aaPredicted RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 ATP5L2Q7Z4Y8 100 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 RNF125Q96EQ8 232 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 NHP2Q9NX24 153 aaKnown RBP11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 C21orf62Q9NYP8 219 aa11.1□□□□□ -0.63
TRAPPC8-207ENST00000580104 ZNF883P0CG24 379 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 IGLC3P0DOY3 106 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 EVI2AP22794 236 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 NPPCP23582 126 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 MDS2Q8NDY4 140 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 OBSL1O75147 1896 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 LEPP41159 167 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 MAJINQ3KP22 176 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 NPIPB5A8MRT5 1133 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 ZNF134P52741 427 aa11.09□□□□□ -0.63
TRAPPC8-207ENST00000580104 BDP1A6H8Y1 2624 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms