RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 SCGB2A1O75556 95 aa16.27■□□□□ 0.2
CDC42EP4-203ENST00000578516 RD3LP0DJH9 198 aa16.27■□□□□ 0.2
CDC42EP4-203ENST00000578516 CD81P60033 236 aa16.27■□□□□ 0.2
CDC42EP4-203ENST00000578516 Q8WTZ3 238 aa16.27■□□□□ 0.2
CDC42EP4-203ENST00000578516 PBDC1Q9BVG4 233 aa16.27■□□□□ 0.2
CDC42EP4-203ENST00000578516 NMES1Q9C002 83 aa16.27■□□□□ 0.2
CDC42EP4-203ENST00000578516 DEDDO75618 318 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 TFPI2P48307 235 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 LYZP61626 148 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 DLK1P80370 383 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 OXA1LQ15070 435 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 TMEM217Q8N7C4 229 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 TRGV9Q99603 122 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 VSIRQ9H7M9 311 aa16.26■□□□□ 0.19
CDC42EP4-203ENST00000578516 CRYBB3P26998 211 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 SLC38A11Q08AI6 406 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 RBPMS2Q6ZRY4 209 aaKnown RBP16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 TCF24Q7RTU0 167 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 GBGT1Q8N5D6 347 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 TMEM252Q8N6L7 170 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 STPG3Q8N7X2 389 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 OR10P1Q8NGE3 313 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 PPP1R1CQ8WVI7 109 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 RNF125Q96EQ8 232 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 METTL26Q96S19 204 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 ASCL2Q99929 193 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 NEURL2Q9BR09 285 aa16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 LYRM2Q9NU23 88 aaPredicted RBP16.25■□□□□ 0.19
CDC42EP4-203ENST00000578516 DFFBO76075 338 aa16.24■□□□□ 0.19
CDC42EP4-203ENST00000578516 PVALBP20472 110 aaPredicted RBP16.24■□□□□ 0.19
CDC42EP4-203ENST00000578516 NPPCP23582 126 aa16.24■□□□□ 0.19
CDC42EP4-203ENST00000578516 FAM90A2PQ658T7 463 aa16.24■□□□□ 0.19
CDC42EP4-203ENST00000578516 UBQLN2Q9UHD9 624 aa16.24■□□□□ 0.19
CDC42EP4-203ENST00000578516 SMAD5-AS1Q9Y6J3 95 aa16.24■□□□□ 0.19
CDC42EP4-203ENST00000578516 DNAH9Q9NYC9 4486 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 HNRNPCP07910 306 aaKnown RBP eCLIP16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 IGHV4-30-4P0DP06 118 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 P2RY1P47900 373 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 TMEM144Q7Z5S9 345 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 GTSCR1Q86UQ5 136 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 DEFB125Q8N687 156 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 U3KQE9 123 aa16.23■□□□□ 0.19
CDC42EP4-203ENST00000578516 TSPAN4O14817 238 aa16.22■□□□□ 0.19
CDC42EP4-203ENST00000578516 WFDC3Q8IUB2 231 aa16.22■□□□□ 0.19
CDC42EP4-203ENST00000578516 RNF126Q9BV68 326 aa16.22■□□□□ 0.19
CDC42EP4-203ENST00000578516 MED28Q9H204 178 aa16.22■□□□□ 0.19
CDC42EP4-203ENST00000578516 C19orf73Q9NVV2 129 aa16.22■□□□□ 0.19
CDC42EP4-203ENST00000578516 DOK5Q9P104 306 aa16.22■□□□□ 0.19
CDC42EP4-203ENST00000578516 TRAV25A0A0B4J276 109 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 MPC2O95563 127 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 FRMD6-AS1P0C7T7 363 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 NHLH2Q02577 135 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 CYP2G1PQ6ZSU1 146 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 FAM24BQ8N5W8 94 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 MBD2Q9UBB5 411 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 RABAC1Q9UI14 185 aa16.21■□□□□ 0.19
CDC42EP4-203ENST00000578516 UBE2L5PA0A1B0GUS4 154 aa16.2■□□□□ 0.18
CDC42EP4-203ENST00000578516 EWSR1Q01844 656 aaKnown RBP eCLIP16.2■□□□□ 0.18
CDC42EP4-203ENST00000578516 GLMPQ8WWB7 406 aa16.2■□□□□ 0.18
CDC42EP4-203ENST00000578516 MGST2Q99735 147 aa16.2■□□□□ 0.18
CDC42EP4-203ENST00000578516 SPAG8Q99932 426 aaPredicted RBP16.2■□□□□ 0.18
CDC42EP4-203ENST00000578516 SULT1A1P50225 295 aa16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 RPL11P62913 178 aaKnown RBP16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 CYCSP99999 105 aaKnown RBP16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 ZNF124Q15973 351 aa16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 ODF3L2Q3SX64 289 aa16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 LAMTOR1Q6IAA8 161 aa16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 C16orf54Q6UWD8 224 aa16.19■□□□□ 0.18
CDC42EP4-203ENST00000578516 OR11H12B2RN74 326 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 E5RGE8 158 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 EIF2B2P49770 351 aaKnown RBP16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 Q5BKY6 102 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 CITED4Q96RK1 184 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 B9D2Q9BPU9 175 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 MS4A6AQ9H2W1 248 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 NPVFQ9HCQ7 196 aa16.18■□□□□ 0.18
CDC42EP4-203ENST00000578516 FNDC10F2Z333 226 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 ORM2P19652 201 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 STX12Q86Y82 276 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 BPIFCQ8NFQ6 507 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 STXBP6Q8NFX7 210 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 OR1B1Q8NGR6 318 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 SRD5A3Q9H8P0 318 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 UQCC1Q9NVA1 299 aa16.17■□□□□ 0.18
CDC42EP4-203ENST00000578516 AGPAT2O15120 278 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 BUB3O43684 328 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 RLN2P04090 185 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 FABP1P07148 127 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 LINC00869P0C866 280 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 CLINT1Q14677 625 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 LEMD1Q68G75 181 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 TEPPQ6URK8 271 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 SBSPONQ8IVN8 264 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 NARS2Q96I59 477 aaKnown RBP16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 TMEM147Q9BVK8 224 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 TMEM231Q9H6L2 316 aa16.16■□□□□ 0.18
CDC42EP4-203ENST00000578516 A0A1W2PS18 150 aa16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 RBMY1BA6NDE4 496 aaKnown RBP16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 RBMY1EA6NEQ0 496 aaKnown RBP16.15■□□□□ 0.18
CDC42EP4-203ENST00000578516 RBMY1DP0C7P1 496 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms