RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 PUS1Q9Y606 427 aaKnown RBP eCLIP2.78□□□□□ -1.96
PTPRM-206ENST00000578093 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.97
PTPRM-206ENST00000578093 TRAV2A0A0B4J234 112 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 TRAV1-2A0A0B4J238 106 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 METTL21EPA6NDL7 271 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF705FA8MVS1 300 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 GNG7O60262 68 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 NDUFB4O95168 129 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 KRASP01116 189 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 IGKV1-39P01597 117 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 IGKV1D-39P04432 117 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 EIF4EP06730 217 aaKnown RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 PRSS2P07478 247 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF705DP0CH99 300 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF705BP0CI00 300 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 HTN3P15516 51 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 PSMA1P25786 263 aaKnown RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 GNRHRP30968 328 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 FUSP35637 526 aaKnown RBP eCLIP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 LPAR6P43657 344 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 CBX5P45973 191 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 P2RY1P47900 373 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 AMTP48728 403 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 EMP1P54849 157 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 MFAP4P55083 255 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 CMC4P56277 68 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 FXYD7P58549 80 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 PAFAH1B2P68402 229 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 CATR1Q13166 79 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 TRAM1Q15629 374 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 IZUMO4Q1ZYL8 232 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 PSMG4Q5JS54 123 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 OGFRL1Q5TC84 451 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 FAM222AQ5U5X8 452 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 C22orf42Q6IC83 251 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 FAM122CQ6P4D5 195 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF705AQ6ZN79 300 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF600Q6ZNG1 722 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 HSD17B13Q7Z5P4 300 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 SPATA12Q7Z6I5 190 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF114Q8NC26 417 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 OR5H6Q8NGV6 325 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 OR1P1Q8NH06 330 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 FCAMRQ8WWV6 532 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 GRAMD2BQ96HH9 432 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 MGLLQ99685 303 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 GINS3Q9BRX5 216 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 KRTAP1-5Q9BYS1 174 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 DUSP21Q9H596 190 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 FNDC4Q9H6D8 234 aaPredicted RBP2.77□□□□□ -1.97
PTPRM-206ENST00000578093 C8orf4Q9NR00 106 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 XCL2Q9UBD3 114 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 TNXBP22105 4242 aa2.77□□□□□ -1.97
PTPRM-206ENST00000578093 IGHV3OR16-12A0A075B7B8 117 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 NBDYA0A0U1RRE5 68 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 FAM90A26D6RGX4 464 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 PDCD5O14737 125 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 CASQ2O14958 399 aaPredicted RBP2.76□□□□□ -1.97
PTPRM-206ENST00000578093 CYB5BO43169 146 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 PGLYRP1O75594 196 aaPredicted RBP2.76□□□□□ -1.97
PTPRM-206ENST00000578093 IFNA21P01568 189 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 IFNA17P01571 189 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 IGKV3-20P01619 116 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 MYL9P24844 172 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 F2RP25116 425 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 CRYBB3P26998 211 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 EIF2B2P49770 351 aaKnown RBP2.76□□□□□ -1.97
PTPRM-206ENST00000578093 BCAP31P51572 246 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 AQP4P55087 323 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 ERVK-16P61578 105 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 S100A12P80511 92 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 PRCDQ00LT1 54 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 ARL6IP1Q15041 203 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 TBCEQ15813 527 aaPredicted RBP2.76□□□□□ -1.97
PTPRM-206ENST00000578093 TIGITQ495A1 244 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 RNF212Q495C1 297 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 TMEM41BQ5BJD5 291 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 SOHLH1Q5JUK2 328 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 C9orf47Q6ZRZ4 202 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 HOGA1Q86XE5 327 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 CLVS1Q8IUQ0 354 aaPredicted RBP2.76□□□□□ -1.97
PTPRM-206ENST00000578093 C6orf223Q8N319 242 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 ZNF709Q8N972 641 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 ZNRF2Q8NHG8 242 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 MRGPRFQ96AM1 343 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 SEC22AQ96IW7 307 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 TMEM56Q96MV1 263 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 RAB40CQ96S21 281 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 TXN2Q99757 166 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 NIPSNAP3BQ9BS92 247 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 YTHDF1Q9BYJ9 559 aaKnown RBP2.76□□□□□ -1.97
PTPRM-206ENST00000578093 CCDC90BQ9GZT6 254 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 SLC35B3Q9H1N7 401 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 SCPEP1Q9HB40 452 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 ACOT13Q9NPJ3 140 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 DIABLOQ9NR28 239 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 NDUFB11Q9NX14 153 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 MBD2Q9UBB5 411 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 DAPK2Q9UIK4 370 aa2.76□□□□□ -1.97
PTPRM-206ENST00000578093 TRAV18A0A075B6X5 111 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms