RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 NUP35Q8NFH5 326 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 ATRXP46100 2492 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 C22orf46C9J442 243 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 BMI1P35226 326 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 OR4B1Q8NGF8 309 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 CNTFRP26992 372 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 RUSC1-AS1Q66K80 236 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 UNQ5815/PRO19632Q6UWF5 114 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 STPG4Q8N801 248 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 TNFRSF19Q9NS68 423 aa11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 CHTOPQ9Y3Y2 248 aaKnown RBP11.92□□□□□ -0.5
CUEDC1-206ENST00000577830 MUC21A0A0G2JKD1 596 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 MUC21A0A140T8X8 626 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 RBP4P02753 201 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 MT-ND6P03923 174 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 GUSBP1Q15486 140 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 MUC21Q5SSG8 566 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 COL5A1-AS1Q5SY13 56 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 SLC25A48Q6ZT89 311 aaKnown RBP11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 C1orf174Q8IYL3 243 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 GAL3ST2Q9H3Q3 398 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 FAM215AQ9Y5M1 114 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 M0QZK8 103 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 TBR1Q16650 682 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 TMEM249Q2WGJ8 235 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 TMEM200BQ69YZ2 307 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 LRBAP50851 2863 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 IZUMO1RA6ND01 250 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 CGB3P0DN86 165 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 CGB7P0DN87 165 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 Q0VG73 95 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 ZNF788Q6ZQV5 615 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 C18orf32Q8TCD1 76 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 C20orf144Q9BQM9 153 aa11.91□□□□□ -0.5
CUEDC1-206ENST00000577830 SNAI2O43623 268 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 NDUFB3O43676 98 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 HYPMO75409 117 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 LHBP01229 141 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 COMPP49747 757 aaPredicted RBP11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 RELNP78509 3460 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 ARHGAP32A7KAX9 2087 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 H0YJW9 148 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 SUB1P53999 127 aaKnown RBP eCLIP11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 TMEM177Q53S58 311 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 C2orf83Q53S99 150 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 GDF5OSQ5U4N7 250 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 PATE2Q6UY27 113 aa11.9□□□□□ -0.5
CUEDC1-206ENST00000577830 TMSB15BA0A087X1C1 80 aa11.9□□□□□ -0.51
CUEDC1-206ENST00000577830 A0A1W2PRE2 83 aa11.9□□□□□ -0.51
CUEDC1-206ENST00000577830 PRNTQ86SH4 94 aa11.9□□□□□ -0.51
CUEDC1-206ENST00000577830 SPACA3Q8IXA5 215 aa11.9□□□□□ -0.51
CUEDC1-206ENST00000577830 UQCR10Q9UDW1 63 aa11.9□□□□□ -0.51
CUEDC1-206ENST00000577830 TM4SF5O14894 197 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 TNFRSF1AP19438 455 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 PTTG1IPP53801 180 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 TCF15Q12870 199 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 NIT1Q86X76 327 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 FAM167A-AS1Q96KT0 104 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 LAMTOR2Q9Y2Q5 125 aa11.89□□□□□ -0.51
CUEDC1-206ENST00000577830 PPIAL4EA0A075B759 164 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 PPIAL4DF5H284 164 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 CHEK1O14757 476 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 PPIAL4FP0DN26 164 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 BSPH1Q075Z2 132 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 ZNF329Q86UD4 541 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 OR4C13Q8NGP0 309 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 P01737 135 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 NBEAP1P0C6P0 100 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 LINC00173Q6ZV60 143 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 Q71RC1 249 aaPredicted RBP11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 EXOC3-AS1Q8N2X6 119 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 OR1L4Q8NGR5 311 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 C22orf15Q8WYQ4 148 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 PTPRBP23467 1997 aa11.88□□□□□ -0.51
CUEDC1-206ENST00000577830 A0A1W2PPI3 338 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 CNIH1O95406 144 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 PRRX1P54821 245 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 VMA21Q3ZAQ7 101 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 NDUFA4L2Q9NRX3 87 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 ZNF257Q9Y2Q1 563 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 TRAV9-1A0A075B6T8 112 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 COL8A1P27658 744 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 IGF2BP2-AS1Q96M15 143 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 BET1LQ9NYM9 111 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 LINC00312Q9Y6C7 94 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 SPTBN4Q9H254 2564 aa11.87□□□□□ -0.51
CUEDC1-206ENST00000577830 hDV102S1A0JD36 115 aa11.86□□□□□ -0.51
CUEDC1-206ENST00000577830 IGLC2P0DOY2 106 aa11.86□□□□□ -0.51
CUEDC1-206ENST00000577830 IGLC3P0DOY3 106 aa11.86□□□□□ -0.51
CUEDC1-206ENST00000577830 HIST1H1EP10412 219 aaKnown RBP11.86□□□□□ -0.51
CUEDC1-206ENST00000577830 OR10J3Q5JRS4 329 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms