RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 LHFPL1Q86WI0 220 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 ZNF709Q8N972 641 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 OR4B1Q8NGF8 309 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 ZFAND1Q8TCF1 268 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 ACY3Q96HD9 319 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 LINC00052Q96N35 136 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 COMMD3Q9UBI1 195 aa8.25□□□□□ -1.09
CTDNEP1-212ENST00000576613 PSG1P11464 419 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 TBPP20226 339 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 ALDH3B2P48448 385 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 RORCP51449 518 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 PSG9Q00887 426 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 EBLN2Q6P2I7 272 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 C6orf223Q8N319 242 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 OR51G1Q8NGK1 321 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 NPIPB3Q92617 1050 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 RNF125Q96EQ8 232 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 SLC35B3Q9H1N7 401 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 KLK11Q9UBX7 282 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 CACFD1Q9UGQ2 172 aa8.24□□□□□ -1.09
CTDNEP1-212ENST00000576613 CEBPZOSA8MTT3 80 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 DEFB1P60022 68 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 LSM3P62310 102 aaKnown RBP8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 ZNF79Q15937 498 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 SAMD13Q5VXD3 122 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 OR8G2PQ6IF36 304 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 ABHD1Q96SE0 405 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 TMEM208Q9BTX3 173 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 PBDC1Q9BVG4 233 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 WDR12Q9GZL7 423 aaKnown RBP8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 MAGT1Q9H0U3 335 aa8.23□□□□□ -1.09
CTDNEP1-212ENST00000576613 NBDYA0A0U1RRE5 68 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 ISLRO14498 428 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 CDS2O95674 445 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 CD3DP04234 171 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 PAX9P55771 341 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 C1orf194Q5T5A4 169 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 FAM78BQ5VT40 261 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 C1orf158Q8N1D5 194 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 Q8N1X5 172 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 OR13C8Q8NGS7 320 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 TERB2Q8NHR7 220 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 RBPMSQ93062 196 aaKnown RBP8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 TMEM222Q9H0R3 208 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 CACNG5Q9UF02 275 aa8.22□□□□□ -1.09
CTDNEP1-212ENST00000576613 NXPH3O95157 252 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 TNFAIP8O95379 198 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 FABP1P07148 127 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR5AC1P0C628 307 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 ELK1P19419 428 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 SUPT4H1P63272 117 aaKnown RBP8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 KLF9Q13886 244 aaPredicted RBP8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 SCGB2B2Q4G0G5 96 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 RNASE12Q5GAN4 147 aaKnown RBP8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 TMEM170AQ8WVE7 144 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 VCX3AQ9NNX9 186 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 RPRMQ9NS64 109 aa8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 C14orf166Q9Y224 244 aaKnown RBP8.21□□□□□ -1.1
CTDNEP1-212ENST00000576613 A0A0J9YX75 114 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 TEX13DA0A0J9YY54 714 aaPredicted RBP8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 ZFP92A6NM28 416 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 LYRM9A8MSI8 78 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 SOCS3O14543 225 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 HPGDSO60760 199 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 MEOX2P50222 304 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 CCL18P55774 89 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 NMSQ5H8A3 153 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 ZNRF2Q8NHG8 242 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 MARCH1Q8TCQ1 289 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 GLYATL2Q8WU03 294 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 PPP1R14BQ96C90 147 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 GPR146Q96CH1 333 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 YIPF6Q96EC8 236 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 IGF2BP2-AS1Q96M15 143 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 NAA60Q9H7X0 242 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 SCRT2Q9NQ03 307 aa8.2□□□□□ -1.1
CTDNEP1-212ENST00000576613 FAM25AB3EWG3 89 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 FAM25CB3EWG5 89 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 FAM25GB3EWG6 89 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 F6UB75 175 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 GABARAPH6UMI1 98 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 GABARAPO95166 117 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 NUDT3O95989 172 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 TAS2R19P59542 299 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 LYZP61626 148 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 TMEM268Q5VZI3 342 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 SELENOHQ8IZQ5 122 aaKnown RBP8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR4D10Q8NGI6 311 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 OR52I2Q8NH67 350 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 LHFPL5Q8TAF8 219 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 DOK5Q9P104 306 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 MTFP1Q9UDX5 166 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 U3KQ87 197 aa8.19□□□□□ -1.1
CTDNEP1-212ENST00000576613 SNRPGP15A8MWD9 76 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 F5H768 121 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 RAB3DO95716 219 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 INSP01308 110 aa8.18□□□□□ -1.1
CTDNEP1-212ENST00000576613 SULT1A3P0DMM9 295 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms