RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TRAV2A0A0B4J234 112 aa17.48■□□□□ 0.39
SNF8-217ENST00000576353 PRSS46E5RG02 174 aa17.48■□□□□ 0.39
SNF8-217ENST00000576353 EIF2B2P49770 351 aaKnown RBP17.48■□□□□ 0.39
SNF8-217ENST00000576353 IFITM3Q01628 133 aa17.48■□□□□ 0.39
SNF8-217ENST00000576353 TRGV9Q99603 122 aa17.48■□□□□ 0.39
SNF8-217ENST00000576353 MS4A6AQ9H2W1 248 aa17.48■□□□□ 0.39
SNF8-217ENST00000576353 PFDN2Q9UHV9 154 aa17.48■□□□□ 0.39
SNF8-217ENST00000576353 IGKV1D-37A0A075B6S9 117 aa17.47■□□□□ 0.39
SNF8-217ENST00000576353 FAM25EA8MYX2 175 aa17.47■□□□□ 0.39
SNF8-217ENST00000576353 IL5P05113 134 aa17.47■□□□□ 0.39
SNF8-217ENST00000576353 TAS2R30P59541 319 aa17.47■□□□□ 0.39
SNF8-217ENST00000576353 USF2Q15853 346 aaPredicted RBP17.47■□□□□ 0.39
SNF8-217ENST00000576353 CITED4Q96RK1 184 aa17.47■□□□□ 0.39
SNF8-217ENST00000576353 RABAC1Q9UI14 185 aa17.47■□□□□ 0.39
SNF8-217ENST00000576353 C5orf51A6NDU8 294 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 SNRPGP15A8MWD9 76 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 CCSO14618 274 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 ZNF90Q03938 601 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 WFDC3Q8IUB2 231 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 THAP8Q8NA92 274 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 RNF125Q96EQ8 232 aa17.46■□□□□ 0.39
SNF8-217ENST00000576353 HELTA6NFD8 242 aa17.45■□□□□ 0.38
SNF8-217ENST00000576353 MBPP02686 304 aaPredicted RBP17.45■□□□□ 0.38
SNF8-217ENST00000576353 NUP62P37198 522 aaPredicted RBP17.45■□□□□ 0.38
SNF8-217ENST00000576353 AP2S1P53680 142 aaPredicted RBP17.45■□□□□ 0.38
SNF8-217ENST00000576353 PAX9P55771 341 aa17.45■□□□□ 0.38
SNF8-217ENST00000576353 DEFA1P59665 94 aa17.45■□□□□ 0.38
SNF8-217ENST00000576353 DEFA3P59666 94 aa17.45■□□□□ 0.38
SNF8-217ENST00000576353 C16orf54Q6UWD8 224 aa17.45■□□□□ 0.38
SNF8-217ENST00000576353 GPN1Q9HCN4 374 aaPredicted RBP17.45■□□□□ 0.38
SNF8-217ENST00000576353 STAB2Q8WWQ8 2551 aa17.45■□□□□ 0.38
SNF8-217ENST00000576353 TSC22D2O75157 780 aa17.44■□□□□ 0.38
SNF8-217ENST00000576353 CFDP00746 253 aaPredicted RBP17.44■□□□□ 0.38
SNF8-217ENST00000576353 OR8G2PQ6IF36 304 aa17.44■□□□□ 0.38
SNF8-217ENST00000576353 C2orf50Q96LR7 162 aa17.44■□□□□ 0.38
SNF8-217ENST00000576353 PBDC1Q9BVG4 233 aa17.44■□□□□ 0.38
SNF8-217ENST00000576353 IGKV1OR2-108A0A075B7D4 117 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 APOC4P55056 127 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 AKR1C1Q04828 323 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 TMEM14EPQ6UXP3 125 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 GSG1LQ6UXU4 331 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 ACOT7LQ6ZUV0 252 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 NRARPQ7Z6K4 114 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 STXBP6Q8NFX7 210 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 MAP6D1Q9H9H5 199 aa17.43■□□□□ 0.38
SNF8-217ENST00000576353 RCL1Q9Y2P8 373 aaKnown RBP17.43■□□□□ 0.38
SNF8-217ENST00000576353 L7N2F9 121 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 BUB3O43684 328 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 VAMP2P63027 116 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 OR2F1Q13607 317 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 TMEM144Q7Z5S9 345 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 APRG1Q8IVJ8 170 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 GLMPQ8WWB7 406 aa17.42■□□□□ 0.38
SNF8-217ENST00000576353 C7orf66A4D0T2 115 aa17.41■□□□□ 0.38
SNF8-217ENST00000576353 PRAF2O60831 178 aa17.41■□□□□ 0.38
SNF8-217ENST00000576353 LYZP61626 148 aa17.41■□□□□ 0.38
SNF8-217ENST00000576353 OR10P1Q8NGE3 313 aa17.41■□□□□ 0.38
SNF8-217ENST00000576353 KIR2DL5BA0A0G2JN68 375 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 KIR2DL5BA0A0G2JPC4 375 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 SMCO3A2RU48 225 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 PMS2P5A8MQ11 134 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 K7EQG2 157 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 UBE2CO00762 179 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 METTL15P1P0C7V9 234 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 DLK1P80370 383 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 KIR2DL5AQ8N109 375 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 KIR2DL5BQ8NHK3 375 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 RETNQ9HD89 108 aa17.4■□□□□ 0.38
SNF8-217ENST00000576353 LSM5Q9Y4Y9 91 aaKnown RBP17.4■□□□□ 0.38
SNF8-217ENST00000576353 TENM3Q9P273 2699 aa17.39■□□□□ 0.37
SNF8-217ENST00000576353 FNDC10F2Z333 226 aa17.39■□□□□ 0.37
SNF8-217ENST00000576353 INMT-MINDY4F8WBC2 141 aa17.39■□□□□ 0.37
SNF8-217ENST00000576353 STPG3Q8N7X2 389 aa17.39■□□□□ 0.37
SNF8-217ENST00000576353 BPIFCQ8NFQ6 507 aa17.39■□□□□ 0.37
SNF8-217ENST00000576353 K7EPK0 472 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 PVALBP20472 110 aaPredicted RBP17.38■□□□□ 0.37
SNF8-217ENST00000576353 DEFB131AP59861 70 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 C1orf194Q5T5A4 169 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 SIGLEC15Q6ZMC9 328 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 DCANP1Q8TF63 244 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 MARVELD1Q9BSK0 173 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 NPVFQ9HCQ7 196 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 MGAT4CQ9UBM8 478 aa17.38■□□□□ 0.37
SNF8-217ENST00000576353 RPL35AP18077 110 aaKnown RBP17.37■□□□□ 0.37
SNF8-217ENST00000576353 ZNF124Q15973 351 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 Q6ZWC4 215 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 FAM24BQ8N5W8 94 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 PPP1R14BQ96C90 147 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 GGACTQ9BVM4 153 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 NRN1Q9NPD7 142 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 FBXL17Q9UF56 701 aa17.37■□□□□ 0.37
SNF8-217ENST00000576353 NBEAL2Q6ZNJ1 2754 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 C3orf84H3BNL1 204 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 CCNKO75909 580 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 S100A7P31151 101 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 BCAP31P51572 246 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 RRAS2P62070 204 aaPredicted RBP17.36■□□□□ 0.37
SNF8-217ENST00000576353 MUC7Q8TAX7 377 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 EDA2RQ9HAV5 297 aa17.36■□□□□ 0.37
SNF8-217ENST00000576353 SLC45A2Q9UMX9 530 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms