RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SPATA12Q7Z6I5 190 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 SAMD12Q8N8I0 201 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 OR4B1Q8NGF8 309 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 OR52E5Q8NH55 327 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 RNASEH2CQ8TDP1 164 aaKnown RBP6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 TMEM170AQ8WVE7 144 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 LINC00052Q96N35 136 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 VCX3BQ9H321 246 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 SCPEP1Q9HB40 452 aa6.99□□□□□ -1.29
CALCOCO2-227ENST00000575560 PSG1P11464 419 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 RPS19P39019 145 aaKnown RBP6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 ID1P41134 155 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 PSMB3P49720 205 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 KRTAP10-2P60368 255 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 SP6Q3SY56 376 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 FAM78BQ5VT40 261 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 LHFPL1Q86WI0 220 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 NPIPB3Q92617 1050 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 RRNAD1Q96FB5 475 aaKnown RBP6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 LINC00588Q9Y4M8 146 aa6.98□□□□□ -1.29
CALCOCO2-227ENST00000575560 A0A0J9YX75 114 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 LYRM9A8MSI8 78 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 A8MTW9 85 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 F6UB75 175 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 M0QYG6 137 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 PGAM2P15259 253 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 UCP1P25874 307 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 RCVRNP35243 200 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 TGFBR1P36897 503 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 RORCP51449 518 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 ETFRF1Q6IPR1 90 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 OR51G1Q8NGK1 321 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 IGF2BP2-AS1Q96M15 143 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 C7orf50Q9BRJ6 194 aaKnown RBP6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 MAGT1Q9H0U3 335 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 HEYLQ9NQ87 328 aaPredicted RBP6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 MYCBP2O75592 4640 aa6.97□□□□□ -1.29
CALCOCO2-227ENST00000575560 ISLRO14498 428 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 CDS2O95674 445 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 PRM2P04554 102 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 NUP62P37198 522 aaPredicted RBP6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 CCL18P55774 89 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 TRIM16LQ309B1 348 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 C1orf194Q5T5A4 169 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 OR8G2PQ6IF36 304 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 EBLN2Q6P2I7 272 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 AMTNQ6UX39 209 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 FAM219AQ8IW50 185 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 SLC24A4Q8NFF2 622 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 GPR146Q96CH1 333 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 RNF125Q96EQ8 232 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 ACY3Q96HD9 319 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 Q9H8V8 135 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
CALCOCO2-227ENST00000575560 PLAC8L1A1L4L8 177 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 EPM2AB3EWF7 344 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 B3GALNT1O75752 331 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 NUDT3O95989 172 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 APOA1P02647 267 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 ELK1P19419 428 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 BTF3P20290 206 aaKnown RBP6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 SNX29P2Q8IUI4 249 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 COQ8AQ8NI60 647 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 KRTAP1-5Q9BYS1 174 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 TMEM222Q9H0R3 208 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 COPZ2Q9P299 210 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 PFDN2Q9UHV9 154 aa6.95□□□□□ -1.3
CALCOCO2-227ENST00000575560 SRRM2Q9UQ35 2752 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 FAT1Q14517 4588 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 SMIM31A0A1B0GVY4 71 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 CBY3A6NI87 242 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 ZNF705GA8MUZ8 300 aaPredicted RBP6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 F5H768 121 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 CRXO43186 299 aaPredicted RBP6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 DEFB130BP0DP73 79 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 DEFB130AP0DP74 79 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 TSPOP30536 169 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 SUPT4H1P63272 117 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 KLF9Q13886 244 aaPredicted RBP6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 FCN2Q15485 313 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 NMSQ5H8A3 153 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 SSX7Q7RTT5 188 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 ARRDC1Q8N5I2 433 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 TERB2Q8NHR7 220 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 RNASE11Q8TAA1 199 aaKnown RBP6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 LHFPL5Q8TAF8 219 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 ZFAND1Q8TCF1 268 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 GLYATL2Q8WU03 294 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 C20orf173Q96LM9 149 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 C17orf77Q96MU5 243 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 ABHD1Q96SE0 405 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 TMEM208Q9BTX3 173 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 PBDC1Q9BVG4 233 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 RPRMQ9NS64 109 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 DOK5Q9P104 306 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 CACNG5Q9UF02 275 aa6.94□□□□□ -1.3
CALCOCO2-227ENST00000575560 IGKV1D-37A0A075B6S9 117 aa6.93□□□□□ -1.3
CALCOCO2-227ENST00000575560 TEX13DA0A0J9YY54 714 aaPredicted RBP6.93□□□□□ -1.3
CALCOCO2-227ENST00000575560 CEBPZOSA8MTT3 80 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms