RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 SELENOKQ9Y6D0 94 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 U3KQE9 123 aa10.14□□□□□ -0.79
CIITA-210ENST00000575513 H3BP45 60 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 SIX6O95475 246 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 APOHP02749 345 aaPredicted RBP10.13□□□□□ -0.79
CIITA-210ENST00000575513 H2BFSP57053 126 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 RAB32Q13637 225 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 TCF24Q7RTU0 167 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 OR51G1Q8NGK1 321 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 GRAMD2BQ96HH9 432 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 WWC2-AS2Q96NR7 200 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 TRGV9Q99603 122 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 SRD5A3Q9H8P0 318 aa10.13□□□□□ -0.79
CIITA-210ENST00000575513 PAIP2BQ9ULR5 123 aaKnown RBP10.13□□□□□ -0.79
CIITA-210ENST00000575513 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
CIITA-210ENST00000575513 IGKV1D-37A0A075B6S9 117 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 IGHV3-49A0A0A0MS15 119 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 RBMY1BA6NDE4 496 aaKnown RBP10.12□□□□□ -0.79
CIITA-210ENST00000575513 RBMY1EA6NEQ0 496 aaKnown RBP10.12□□□□□ -0.79
CIITA-210ENST00000575513 ZFP92A6NM28 416 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 PMS2P5A8MQ11 134 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 L7N2F9 121 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 DFFBO76075 338 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 CFDP00746 253 aaPredicted RBP10.12□□□□□ -0.79
CIITA-210ENST00000575513 HNRNPCP07910 306 aaKnown RBP eCLIP10.12□□□□□ -0.79
CIITA-210ENST00000575513 RBMY1DP0C7P1 496 aaKnown RBP10.12□□□□□ -0.79
CIITA-210ENST00000575513 PSG1P11464 419 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 PVALBP20472 110 aaPredicted RBP10.12□□□□□ -0.79
CIITA-210ENST00000575513 VAMP2P63027 116 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 LILRB2Q8N423 598 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 THAP8Q8NA92 274 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 SPATA25Q9BR10 227 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 MGAT4CQ9UBM8 478 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 PFDN2Q9UHV9 154 aa10.12□□□□□ -0.79
CIITA-210ENST00000575513 STAB2Q8WWQ8 2551 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 IGHV3OR16-13A0A075B7E8 117 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 IGHV3-74A0A0B4J1X5 117 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 HELTA6NFD8 242 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 FNDC10F2Z333 226 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 IL4P05112 153 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 NUP62P37198 522 aaPredicted RBP10.11□□□□□ -0.79
CIITA-210ENST00000575513 EIF2B2P49770 351 aaKnown RBP10.11□□□□□ -0.79
CIITA-210ENST00000575513 AP2S1P53680 142 aaPredicted RBP10.11□□□□□ -0.79
CIITA-210ENST00000575513 S100A10P60903 97 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 DLK1P80370 383 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 OR8G2PQ6IF36 304 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 RCHY1Q96PM5 261 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 WFDC10AQ9H1F0 79 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 MED28Q9H204 178 aa10.11□□□□□ -0.79
CIITA-210ENST00000575513 LOC102724200A0A096LPH7 203 aaPredicted RBP10.1□□□□□ -0.79
CIITA-210ENST00000575513 DEDDO75618 318 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 RLN2P04090 185 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 METTL15P1P0C7V9 234 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 P2RY1P47900 373 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 USF2Q15853 346 aaPredicted RBP10.1□□□□□ -0.79
CIITA-210ENST00000575513 ODF3L2Q3SX64 289 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 OR10P1Q8NGE3 313 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 RNF125Q96EQ8 232 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 GGACTQ9BVM4 153 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 MS4A6AQ9H2W1 248 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 LYRM2Q9NU23 88 aaPredicted RBP10.1□□□□□ -0.79
CIITA-210ENST00000575513 RABAC1Q9UI14 185 aa10.1□□□□□ -0.79
CIITA-210ENST00000575513 TENM3Q9P273 2699 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 IGKV1OR2-108A0A075B7D4 117 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 DNASE2O00115 360 aaPredicted RBP10.09□□□□□ -0.79
CIITA-210ENST00000575513 BUB3O43684 328 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 CCNKO75909 580 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 CAV2P51636 162 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
CIITA-210ENST00000575513 ZNF90Q03938 601 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 FCN2Q15485 313 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 ACOT7LQ6ZUV0 252 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 TMEM144Q7Z5S9 345 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 PPP1R1CQ8WVI7 109 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 CITED4Q96RK1 184 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 GGTLC1Q9BX51 225 aa10.09□□□□□ -0.79
CIITA-210ENST00000575513 KIR2DL5BA0A0G2JN68 375 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 KIR2DL5BA0A0G2JPC4 375 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 E5RGE8 158 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 H0YIZ8 118 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 CXCL3P19876 107 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 BCAP31P51572 246 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 ARL16Q0P5N6 197 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 C1orf194Q5T5A4 169 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 KIR2DL5AQ8N109 375 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 GBGT1Q8N5D6 347 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 TMEM252Q8N6L7 170 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 KIR2DL5BQ8NHK3 375 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 GLMPQ8WWB7 406 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 ASB13Q8WXK3 278 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 RNF126Q9BV68 326 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 SEPSECSQ9HD40 501 aaKnown RBP10.08□□□□□ -0.8
CIITA-210ENST00000575513 UBQLN2Q9UHD9 624 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 SLC45A2Q9UMX9 530 aa10.08□□□□□ -0.8
CIITA-210ENST00000575513 NBEAL2Q6ZNJ1 2754 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 IGKV3-7A0A075B6H7 116 aa10.07□□□□□ -0.8
CIITA-210ENST00000575513 UBE2CO00762 179 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms