RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 GINS3Q9BRX5 216 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 WDR12Q9GZL7 423 aaKnown RBP6.39□□□□□ -1.39
SMG6-216ENST00000575176 MS4A6AQ9H2W1 248 aa6.39□□□□□ -1.39
SMG6-216ENST00000575176 C7orf66A4D0T2 115 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 OR4C46A6NHA9 309 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 CENPXA8MT69 81 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 IL4P05112 153 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 IL5P05113 134 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 H2AFB2P0C5Z0 115 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 NKX2-1P43699 371 aaPredicted RBP6.38□□□□□ -1.39
SMG6-216ENST00000575176 INPP1P49441 399 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 EWSR1Q01844 656 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMG6-216ENST00000575176 ZNF846Q147U1 533 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 IAH1Q2TAA2 248 aaPredicted RBP6.38□□□□□ -1.39
SMG6-216ENST00000575176 GSG1LQ6UXU4 331 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 RBPMS2Q6ZRY4 209 aaKnown RBP6.38□□□□□ -1.39
SMG6-216ENST00000575176 RNF125Q96EQ8 232 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 SMIM8Q96KF7 97 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
SMG6-216ENST00000575176 OVOL2Q9BRP0 275 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 GGTLC1Q9BX51 225 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 BATF3Q9NR55 127 aa6.38□□□□□ -1.39
SMG6-216ENST00000575176 EPPK1P58107 5090 aaKnown RBP6.38□□□□□ -1.39
SMG6-216ENST00000575176 FRAS1Q86XX4 4008 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 K7EPK0 472 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 TSC22D2O75157 780 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 MED6O75586 246 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 HNRNPCP07910 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMG6-216ENST00000575176 SPANXN5Q5MJ07 72 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 OR8G2PQ6IF36 304 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 ETFRF1Q6IPR1 90 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 NOXA1Q86UR1 476 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 GBGT1Q8N5D6 347 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 OR51G1Q8NGK1 321 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 METTL26Q96S19 204 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 MARVELD1Q9BSK0 173 aa6.37□□□□□ -1.39
SMG6-216ENST00000575176 IGKV3-7A0A075B6H7 116 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 LOC102724200A0A096LPH7 203 aaPredicted RBP6.36□□□□□ -1.39
SMG6-216ENST00000575176 FAM240BA0A1B0GVZ2 78 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 IFNA4P05014 189 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 RD3LP0DJH9 198 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 C4BPBP20851 252 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 NPPCP23582 126 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 GATA2P23769 480 aaPredicted RBP6.36□□□□□ -1.39
SMG6-216ENST00000575176 TFPI2P48307 235 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 TAS2R30P59541 319 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 LAMTOR1Q6IAA8 161 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 TMEM144Q7Z5S9 345 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 TRPT1Q86TN4 253 aaKnown RBP6.36□□□□□ -1.39
SMG6-216ENST00000575176 WFDC3Q8IUB2 231 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 C12orf45Q8N5I9 185 aaPredicted RBP6.36□□□□□ -1.39
SMG6-216ENST00000575176 GRAMD2BQ96HH9 432 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 SLC35E1Q96K37 410 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 TUBA4BQ9H853 241 aa6.36□□□□□ -1.39
SMG6-216ENST00000575176 KIR2DL5BA0A0G2JN68 375 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 KIR2DL5BA0A0G2JPC4 375 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 IGSF23A1L1A6 192 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 FNDC10F2Z333 226 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 H0YIZ8 118 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 H3BRN7 92 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 MRPS12O15235 138 aaKnown RBP6.35□□□□□ -1.39
SMG6-216ENST00000575176 METTL15P1P0C7V9 234 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 EIF2B2P49770 351 aaKnown RBP6.35□□□□□ -1.39
SMG6-216ENST00000575176 H2BFSP57053 126 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 PLP1P60201 277 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 DLK1P80370 383 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 OR2F1Q13607 317 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 VWC2Q2TAL6 325 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 DEFB135Q30KP9 77 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 CASC10Q5T4H9 136 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 LEMD1Q68G75 181 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 PATE2Q6UY27 113 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 KIR2DL5AQ8N109 375 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 KIR2DL5BQ8NHK3 375 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 MUC7Q8TAX7 377 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 Q8WTZ3 238 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 RAB40CQ96S21 281 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 ZMAT4Q9H898 229 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 PSENENQ9NZ42 101 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 TP53TG1Q9Y2A0 90 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 STRAPQ9Y3F4 350 aaKnown RBP6.35□□□□□ -1.39
SMG6-216ENST00000575176 DNAH10Q8IVF4 4471 aa6.35□□□□□ -1.39
SMG6-216ENST00000575176 DNAH2Q9P225 4427 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 ZFP92A6NM28 416 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 A8MTW9 85 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 SCGB1D2O95969 90 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 IFNA21P01568 189 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 CD5P06127 495 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 ZNF688P0C7X2 276 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 DEFB131AP59861 70 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 DEFB1P60022 68 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 RAB11AP62491 216 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 RAB32Q13637 225 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 GDF5OSQ5U4N7 250 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 SIGLEC15Q6ZMC9 328 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 Q6ZWC4 215 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 CSNK1G2-AS1Q8NCQ2 148 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 STXBP6Q8NFX7 210 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 RNF183Q96D59 192 aa6.34□□□□□ -1.39
SMG6-216ENST00000575176 C2orf50Q96LR7 162 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms