RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 BLNKQ8WV28 456 aa11.12□□□□□ -0.63
VPS33B-208ENST00000574755 CCL19Q99731 98 aa11.12□□□□□ -0.63
VPS33B-208ENST00000574755 TYMSP04818 313 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 S100A9P06702 114 aaKnown RBP11.11□□□□□ -0.63
VPS33B-208ENST00000574755 CDX1P47902 265 aaPredicted RBP11.11□□□□□ -0.63
VPS33B-208ENST00000574755 RANP62826 216 aaKnown RBP11.11□□□□□ -0.63
VPS33B-208ENST00000574755 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 ZNF320A2RRD8 509 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 SLC17A3O00476 420 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 FAM106CPP0CH98 169 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 SAA4P35542 130 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 LEMD1Q68G75 181 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 ZNF329Q86UD4 541 aa11.11□□□□□ -0.63
VPS33B-208ENST00000574755 VPS13CQ709C8 3753 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 NDPQ00604 133 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 PCP4L1A6NKN8 68 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 NPIPB5A8MRT5 1133 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 IGKV1-17P01599 117 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 ASPHD1Q5U4P2 390 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 LINC00479Q96M42 142 aa11.1□□□□□ -0.63
VPS33B-208ENST00000574755 PEX7O00628 323 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 GOSR1O95249 250 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 FABP1P07148 127 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 NBEAP1P0C6P0 100 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 SMIM6P0DI80 62 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 MGST1P10620 155 aaKnown RBP11.09□□□□□ -0.63
VPS33B-208ENST00000574755 CNN1P51911 297 aaKnown RBP11.09□□□□□ -0.63
VPS33B-208ENST00000574755 FAM168AQ92567 244 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 IGF2BP2-AS1Q96M15 143 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 PIMREGQ9BSJ6 248 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 IL36BQ9NZH7 164 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 C1RLQ9NZP8 487 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 CDC42EP3Q9UKI2 254 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 S4R3C0 116 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 DOPEY1Q5JWR5 2465 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 CACNA1BQ00975 2339 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 GP9P14770 177 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 BRS3P32247 399 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 PDZD11Q5EBL8 140 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 ACTL10Q5JWF8 245 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 FAM120AOSQ5T036 256 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 GFI1BQ5VTD9 330 aa11.09□□□□□ -0.63
VPS33B-208ENST00000574755 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
VPS33B-208ENST00000574755 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 IFITM10A6NMD0 228 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 TAS2R60P59551 318 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 TTC9CQ8N5M4 171 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 Q8N9W7 124 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 AJUBAQ96IF1 538 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 FANCD2OSQ96PS1 177 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 SLC25A39Q9BZJ4 359 aaPredicted RBP11.08□□□□□ -0.64
VPS33B-208ENST00000574755 NPFFO15130 113 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 GNG7O60262 68 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 GCGP01275 180 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 IGLV2-8P01709 118 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 SLC25A5P05141 298 aaKnown RBP11.08□□□□□ -0.64
VPS33B-208ENST00000574755 RNF224P0DH78 156 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 MYCNOSP40205 109 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 NHLRC2Q8NBF2 726 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 GAR1Q9NY12 217 aaKnown RBP11.08□□□□□ -0.64
VPS33B-208ENST00000574755 PITPNC1Q9UKF7 332 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 V9GYV3 84 aa11.08□□□□□ -0.64
VPS33B-208ENST00000574755 USP9XQ93008 2570 aaPredicted RBP11.07□□□□□ -0.64
VPS33B-208ENST00000574755 IGHV7-81A0A0B4J1V7 117 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 PGPA6NDG6 321 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 S100A2P29034 98 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 GNG5P63218 68 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 HIST3H2BBQ8N257 126 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 THYN1Q9P016 225 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
VPS33B-208ENST00000574755 TRAV34A0A0B4J273 112 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 H3BTX0 84 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 IBA57Q5T440 356 aaKnown RBP11.06□□□□□ -0.64
VPS33B-208ENST00000574755 MRPL27Q9P0M9 148 aaKnown RBP11.06□□□□□ -0.64
VPS33B-208ENST00000574755 EPDR1Q9UM22 224 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 TRAPPC1Q9Y5R8 145 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 ABCA2Q9BZC7 2435 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 IGHV4-61A0A0C4DH41 118 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 CENPVL3A0A0U1RRI6 287 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 ISLRO14498 428 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 TOMM40O96008 361 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 IL4P05112 153 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 HIST1H1BP16401 226 aaKnown RBP11.06□□□□□ -0.64
VPS33B-208ENST00000574755 MFAP4P55083 255 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 ATP5J2P56134 94 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 UBE2G1P62253 170 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 OSTCQ9NRP0 149 aa11.06□□□□□ -0.64
VPS33B-208ENST00000574755 POLR3KQ9Y2Y1 108 aaPredicted RBP11.06□□□□□ -0.64
VPS33B-208ENST00000574755 TRAV9-1A0A075B6T8 112 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 TRAV30A0A087WSZ9 112 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 HLA-DRB1P01911 266 aa11.05□□□□□ -0.64
VPS33B-208ENST00000574755 RPL15P61313 204 aaKnown RBP11.05□□□□□ -0.64
VPS33B-208ENST00000574755 Q56UQ5 140 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms