RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 BMPR1BO00238 502 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 IFNA10P01566 189 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 IGHV3-23P01764 117 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 REG1AP05451 166 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 H2AFB1P0C5Y9 115 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 SFTA3P0C7M3 94 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 DEFA4P12838 97 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 SERF2P84101 59 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 AARDQ4LEZ3 155 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 FAM209BQ5JX69 171 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 C19orf35Q6ZS72 473 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 PUSL1Q8N0Z8 303 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 QTRT1Q9BXR0 403 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 NKX6-2Q9C056 277 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 WDR61Q9GZS3 305 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 EIF5A2Q9GZV4 153 aaKnown RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 TUBA4BQ9H853 241 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 HEYLQ9NQ87 328 aaPredicted RBP7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 FKBP11Q9NYL4 201 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 FBXL7Q9UJT9 491 aa7.36□□□□□ -1.23
NPLOC4-216ENST00000574344 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 TRBV9A0A0B4J1U6 114 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 NPIPB5A8MRT5 1133 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 C3orf84H3BNL1 204 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 AGPAT2O15120 278 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 MPDU1O75352 247 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 CSN3P07498 182 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 IL6RP08887 468 aaPredicted RBP7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 AREGP15514 252 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 FGF7P21781 194 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 SNCAP37840 140 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 AKR1C1Q04828 323 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 POU2AF1Q16633 256 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 GUK1Q16774 197 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 TMEM41BQ5BJD5 291 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 OR4A47Q6IF82 309 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 OR4A5Q8NH83 315 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 LYPD6BQ8NI32 183 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 GGACTQ9BVM4 153 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 PLEKHA3Q9HB20 300 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 BET1LQ9NYM9 111 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 CARHSP1Q9Y2V2 147 aaKnown RBP7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 S4R3C0 116 aa7.35□□□□□ -1.23
NPLOC4-216ENST00000574344 KMT2CQ8NEZ4 4911 aaKnown RBP7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 A0A1B0GW64 132 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 E7EUB6 86 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 GGCTO75223 188 aaKnown RBP7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 MYOD1P15172 320 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 HIST1H1BP16401 226 aaKnown RBP7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 ARL3P36405 182 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 PPT1P50897 306 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 ATP5IP56385 69 aaPredicted RBP7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 BRWD1-AS2P59051 145 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 CD81P60033 236 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 CLEC19AQ6UXS0 136 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 Q8N1Y9 231 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 SLC24A4Q8NFF2 622 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 MUC7Q8TAX7 377 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 EEF1AKMT3Q96AZ1 226 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 COMMD5Q9GZQ3 224 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 TMEM231Q9H6L2 316 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 SIGLEC8Q9NYZ4 499 aa7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 TMA7Q9Y2S6 64 aaKnown RBP7.34□□□□□ -1.23
NPLOC4-216ENST00000574344 SMCO3A2RU48 225 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 IZUMO1RA6ND01 250 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 NDUFB8O95169 186 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 OR2C1O95371 312 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 CTRB1P17538 263 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 NPY1RP25929 384 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 TAGLN2P37802 199 aaKnown RBP7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 ELLP55199 621 aaPredicted RBP7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 DLK1P80370 383 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 RAB31Q13636 194 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 GUCA2BQ16661 112 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 CD300EQ496F6 205 aaPredicted RBP7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 CTRB2Q6GPI1 263 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 OR2K2Q8NGT1 345 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 OR5B3Q8NH48 314 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 OR51B2Q9Y5P1 312 aa7.33□□□□□ -1.24
NPLOC4-216ENST00000574344 TRAV3A0A0B4J244 114 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 A0A1B0GV50 99 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 ZNF320A2RRD8 509 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 MAP1LC3B2A6NCE7 125 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 C2orf70A6NJV1 201 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 UPK2O00526 184 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 CYB5BO43169 146 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 SCO1O75880 301 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 IFNA4P05014 189 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 CRYGCP07315 174 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 FOLR2P14207 255 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 FHITP49789 147 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 HSPE1P61604 102 aaKnown RBP7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 PRCDQ00LT1 54 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 VWC2Q2TAL6 325 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 ACOT6Q3I5F7 207 aaPredicted RBP7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 FAM106AQ4KMX7 169 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 SPINK9Q5DT21 86 aa7.32□□□□□ -1.24
NPLOC4-216ENST00000574344 SFT2D1Q8WV19 159 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms