RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ADIPOQQ15848 244 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 HCP5Q6MZN7 132 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 TCF24Q7RTU0 167 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 OR1B1Q8NGR6 318 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 CHRDL1Q9BU40 450 aa15.31■□□□□ 0.04
SCARF1-206ENST00000573852 KLHDC1Q8N7A1 406 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 TMEM186Q96B77 213 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 KLF12Q9Y4X4 402 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 Q56UQ5 140 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 KIR3DL3Q8N743 410 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 OR8B3Q8NGG8 313 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 URB1-AS1Q96HZ7 61 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 OR8B2Q96RD0 313 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 PMCHL1Q16048 86 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 IGFL3Q6UXB1 125 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 OR2D3Q8NGH3 330 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 PERPQ96FX8 193 aa15.3■□□□□ 0.04
SCARF1-206ENST00000573852 PPIAL4EA0A075B759 164 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 C2orf70A6NJV1 201 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 PPIAL4DF5H284 164 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 K7EM74 188 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 PPIAL4FP0DN26 164 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 TMEM108Q6UXF1 575 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 LINC00311Q8N616 119 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 ZNF596Q8TC21 504 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 GPR82Q96P67 336 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 MLST8Q9BVC4 326 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 MAP1BP46821 2468 aaKnown RBP15.29■□□□□ 0.04
SCARF1-206ENST00000573852 IGHV3-72A0A0B4J1Y9 119 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 TMEM178BH3BS89 294 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 H3BTX0 84 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 NBEAP1P0C6P0 100 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 TSPOP30536 169 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 Q6ZS92 163 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 ATP5L2Q7Z4Y8 100 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 SPATA12Q7Z6I5 190 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 WFDC8Q8IUA0 241 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 CCL17Q92583 94 aa15.29■□□□□ 0.04
SCARF1-206ENST00000573852 OTOGLQ3ZCN5 2332 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 IGHV3-21A0A0B4J1V1 117 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 IGLC7A0M8Q6 106 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 CRYGCP07315 174 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 APELAP0DMC3 54 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 CD24P25063 80 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 FAM71F2Q6NXP2 309 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 DCHS1Q96JQ0 3298 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 SIAH2O43255 324 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 VMA21Q3ZAQ7 101 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 STXBP6Q8NFX7 210 aa15.28■□□□□ 0.04
SCARF1-206ENST00000573852 ENSAO43768 121 aaKnown RBP15.27■□□□□ 0.04
SCARF1-206ENST00000573852 LEMD1Q68G75 181 aa15.27■□□□□ 0.04
SCARF1-206ENST00000573852 GTSF1Q8WW33 167 aa15.27■□□□□ 0.04
SCARF1-206ENST00000573852 RPP21Q9H633 154 aaKnown RBP15.27■□□□□ 0.04
SCARF1-206ENST00000573852 CLEC5AQ9NY25 188 aa15.27■□□□□ 0.04
SCARF1-206ENST00000573852 CTSZQ9UBR2 303 aa15.27■□□□□ 0.04
SCARF1-206ENST00000573852 TRAV9-2A0A087WT02 112 aa15.27■□□□□ 0.03
SCARF1-206ENST00000573852 SH2D7A6NKC9 451 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-206ENST00000573852 TNFRSF13BO14836 293 aaPredicted RBP15.27■□□□□ 0.03
SCARF1-206ENST00000573852 NDUFB3O43676 98 aa15.27■□□□□ 0.03
SCARF1-206ENST00000573852 SSX8Q7RTT4 187 aa15.27■□□□□ 0.03
SCARF1-206ENST00000573852 PRSS22Q9GZN4 317 aa15.27■□□□□ 0.03
SCARF1-206ENST00000573852 KALRNO60229 2985 aa15.27■□□□□ 0.03
SCARF1-206ENST00000573852 PKDREJQ9NTG1 2253 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 M0QZ24 198 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 FAM87AP0C7U9 286 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 CA7P43166 264 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 HINT1P49773 126 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-206ENST00000573852 DLX6P56179 175 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 C8orf31Q8N9H6 132 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 CUL9Q8IWT3 2517 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 IGLL1P15814 213 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 LOXP28300 417 aaPredicted RBP15.26■□□□□ 0.03
SCARF1-206ENST00000573852 HBBP68871 147 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 TRGV9Q99603 122 aa15.26■□□□□ 0.03
SCARF1-206ENST00000573852 GP9P14770 177 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 ZNF137PP52743 207 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 FOXA3P55318 350 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-206ENST00000573852 BSPH1Q075Z2 132 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 LRRC10Q5BKY1 277 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 SMIM12Q96EX1 92 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 GSX1Q9H4S2 264 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-206ENST00000573852 DMXL2Q8TDJ6 3036 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 C19orf71A6NCJ1 209 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 TCF21O43680 179 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 TOMM40O96008 361 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 PVRIGQ6DKI7 326 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 ETFRF1Q6IPR1 90 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 FAM57AQ8TBR7 257 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 PGLYRP4Q96LB8 373 aa15.25■□□□□ 0.03
SCARF1-206ENST00000573852 MRPS16Q9Y3D3 137 aaKnown RBP15.25■□□□□ 0.03
SCARF1-206ENST00000573852 ABCA1O95477 2261 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 ADGRG4Q8IZF6 3080 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 LTAP01374 205 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 CNTFRP26992 372 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 FAM120AOSQ5T036 256 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 IGHV2-26A0A0B4J1V2 119 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 A8MWL6 223 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 MC5RP33032 325 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 Q6ZVH6 145 aa15.24■□□□□ 0.03
SCARF1-206ENST00000573852 C5orf17Q8NAS9 161 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms