RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 ZNF701M0R085 212 aaPredicted RBP5.51□□□□□ -1.53
NUP88-205ENST00000572809 SCGB2A1O75556 95 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 NXPH3O95157 252 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 APOHP02749 345 aaPredicted RBP5.51□□□□□ -1.53
NUP88-205ENST00000572809 NPPCP23582 126 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 BMI1P35226 326 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 TFPI2P48307 235 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 SMCO1Q147U7 214 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 ZNF79Q15937 498 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 ODF3L2Q3SX64 289 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 TMEM128Q5BJH2 165 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 NMSQ5H8A3 153 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 TCF24Q7RTU0 167 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 TMED4Q7Z7H5 227 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 NOXA1Q86UR1 476 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 GBGT1Q8N5D6 347 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 IL17DQ8TAD2 202 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 RNASEH2CQ8TDP1 164 aaKnown RBP5.51□□□□□ -1.53
NUP88-205ENST00000572809 DEDD2Q8WXF8 326 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 SLC25A21Q9BQT8 299 aaPredicted RBP5.51□□□□□ -1.53
NUP88-205ENST00000572809 OVOL2Q9BRP0 275 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 RBM38Q9H0Z9 239 aaKnown RBP5.51□□□□□ -1.53
NUP88-205ENST00000572809 VSIRQ9H7M9 311 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 MRPL36Q9P0J6 103 aaKnown RBP5.51□□□□□ -1.53
NUP88-205ENST00000572809 SHPKQ9UHJ6 478 aa5.51□□□□□ -1.53
NUP88-205ENST00000572809 IGHV3-66A0A0C4DH42 116 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 A0A1W2PS18 150 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 DNASE2O00115 360 aaPredicted RBP5.5□□□□□ -1.53
NUP88-205ENST00000572809 UBE2CO00762 179 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 DFFBO76075 338 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 IFNA10P01566 189 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 SLC25A4P12235 298 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 NPY1RP25929 384 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 CRYBB3P26998 211 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 APOC4P55056 127 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 SRPXP78539 464 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 TNFRSF9Q07011 255 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 TIGITQ495A1 244 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 SPANXN2Q5MJ10 180 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 ETFRF1Q6IPR1 90 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 PRSS54Q6PEW0 395 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 Q6ZWC4 215 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 APRG1Q8IVJ8 170 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 SLC24A4Q8NFF2 622 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 Q8WTZ3 238 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 METTL26Q96S19 204 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 RBKSQ9H477 322 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 TMEM231Q9H6L2 316 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 HSPB7Q9UBY9 170 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 U3KQ87 197 aa5.5□□□□□ -1.53
NUP88-205ENST00000572809 KIR2DL5BA0A0G2JN68 375 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 KIR2DL5BA0A0G2JPC4 375 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 DUXBA0A1W2PPF3 345 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 SPRY2O43597 315 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 IGKV1-17P01599 117 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 RPL35AP18077 110 aaKnown RBP5.49□□□□□ -1.53
NUP88-205ENST00000572809 OR10J1P30954 320 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 INPP1P49441 399 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 RND2P52198 227 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 ATP5IP56385 69 aaPredicted RBP5.49□□□□□ -1.53
NUP88-205ENST00000572809 TIRAPP58753 221 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 YPEL3P61236 119 aaPredicted RBP5.49□□□□□ -1.53
NUP88-205ENST00000572809 KIR2DL5AQ8N109 375 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 LRTM2Q8N967 370 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 OR1S2Q8NGQ3 325 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 OR1S1Q8NH92 325 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 KIR2DL5BQ8NHK3 375 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 DTD1Q8TEA8 209 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 TMEM170AQ8WVE7 144 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 NPIPB3Q92617 1050 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 NARS2Q96I59 477 aaKnown RBP5.49□□□□□ -1.53
NUP88-205ENST00000572809 MS4A6AQ9H2W1 248 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 MAP6D1Q9H9H5 199 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 TP53TG1Q9Y2A0 90 aa5.49□□□□□ -1.53
NUP88-205ENST00000572809 TRAV2A0A0B4J234 112 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 NAP1L6A6NFF2 107 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 PITX3O75364 302 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 SFT2D2O95562 160 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 SLPIP03973 132 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 IFNA4P05014 189 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 IGLC1P0CG04 106 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 RD3LP0DJH9 198 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 SLC25A6P12236 298 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 RBMS2Q15434 407 aaKnown RBP5.48□□□□□ -1.53
NUP88-205ENST00000572809 BAK1Q16611 211 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 CENPSQ8N2Z9 138 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 RNF183Q96D59 192 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 ACY3Q96HD9 319 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 GRAMD2BQ96HH9 432 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 KRTAP3-1Q9BYR8 98 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 SRRQ9GZT4 340 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 CSTL1Q9H114 145 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 RABAC1Q9UI14 185 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 TMED3Q9Y3Q3 217 aa5.48□□□□□ -1.53
NUP88-205ENST00000572809 MPTX1A8MV57 137 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 FAM90A26D6RGX4 464 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 MED6O75586 246 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 HNRNPCP07910 306 aaKnown RBP eCLIP5.47□□□□□ -1.53
NUP88-205ENST00000572809 HOXB5P09067 269 aa5.47□□□□□ -1.53
NUP88-205ENST00000572809 GPX4P36969 197 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms