RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 MAP6D1Q9H9H5 199 aa7.57□□□□□ -1.2
GTF3C1-213ENST00000571886 hCG_2014768A0A024R1R8 64 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 PTTG1O95997 202 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 IFNA21P01568 189 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 H2AFB2P0C5Z0 115 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 NKX2-1P43699 371 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 ATP5IP56385 69 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 DEFA1P59665 94 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 DEFA3P59666 94 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 RAB11AP62491 216 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 RPL11P62913 178 aaKnown RBP7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 OR2F1Q13607 317 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 IAH1Q2TAA2 248 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 C16orf54Q6UWD8 224 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 CHAC2Q8WUX2 184 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 GLMPQ8WWB7 406 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 SLC35E1Q96K37 410 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 CIB3Q96Q77 187 aaPredicted RBP7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 OVOL2Q9BRP0 275 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 NUDT15Q9NV35 164 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 PSENENQ9NZ42 101 aa7.56□□□□□ -1.2
GTF3C1-213ENST00000571886 CSMD3Q7Z407 3707 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 FAM240BA0A1B0GVZ2 78 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 A0A1W2PS18 150 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 ZFP92A6NM28 416 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 K7EQG2 157 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 DNASE2O00115 360 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 SSSCA1O60232 199 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 SCGB1D2O95969 90 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 GATA2P23769 480 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 DEFB131AP59861 70 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 ASAH1Q13510 395 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 LEMD1Q68G75 181 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 THAP8Q8NA92 274 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 STXBP6Q8NFX7 210 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 MUC7Q8TAX7 377 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 ZNF431Q8TF32 576 aaPredicted RBP7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 DCANP1Q8TF63 244 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 SMIM8Q96KF7 97 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 GSKIPQ9P0R6 139 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 RABAC1Q9UI14 185 aa7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 RCL1Q9Y2P8 373 aaKnown RBP7.55□□□□□ -1.2
GTF3C1-213ENST00000571886 RYR3Q15413 4870 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 BUB3O43684 328 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 SCGB2A1O75556 95 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 MBPP02686 304 aaPredicted RBP7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 BMI1P35226 326 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 PAFAH1B2P68402 229 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 ARL16Q0P5N6 197 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 ZFAND6Q6FIF0 208 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 RNF125Q96EQ8 232 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 TRGV9Q99603 122 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 PBDC1Q9BVG4 233 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 TMEM231Q9H6L2 316 aa7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 STRAPQ9Y3F4 350 aaKnown RBP7.54□□□□□ -1.2
GTF3C1-213ENST00000571886 TRAV2A0A0B4J234 112 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 FAM25EA8MYX2 175 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 C3orf84H3BNL1 204 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 CD5P06127 495 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 METTL15P1P0C7V9 234 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 LYZP61626 148 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 RRAS2P62070 204 aaPredicted RBP7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 RPP30P78346 268 aaKnown RBP7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 DEFB135Q30KP9 77 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 CASC10Q5T4H9 136 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 OR8G2PQ6IF36 304 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 MZT2BQ6NZ67 158 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 TMEM14EPQ6UXP3 125 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 ACOT7LQ6ZUV0 252 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 C12orf45Q8N5I9 185 aaPredicted RBP7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 C11orf1Q9H5F2 150 aa7.53□□□□□ -1.2
GTF3C1-213ENST00000571886 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 C5orf51A6NDU8 294 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 SNRPGP15A8MWD9 76 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 K7EPK0 472 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 ZNF688P0C7X2 276 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 EIF2B2P49770 351 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 CMC4P56277 68 aaPredicted RBP7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 EWSR1Q01844 656 aaKnown RBP eCLIP7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 IL15RAQ13261 267 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 NRARPQ7Z6K4 114 aa7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 NARS2Q96I59 477 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 LSM5Q9Y4Y9 91 aaKnown RBP7.52□□□□□ -1.21
GTF3C1-213ENST00000571886 KIR2DL5BA0A0G2JN68 375 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 KIR2DL5BA0A0G2JPC4 375 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 SPRY2O43597 315 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 IL5P05113 134 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 GIG44P09565 113 aaPredicted RBP7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 LYL1P12980 280 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 APOC4P55056 127 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 DEFB1P60022 68 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 SIGLEC15Q6ZMC9 328 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 Q6ZWC4 215 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 TMEM144Q7Z5S9 345 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 KIR2DL5AQ8N109 375 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 KIR2DL5BQ8NHK3 375 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 RNF183Q96D59 192 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 GRAMD2BQ96HH9 432 aa7.51□□□□□ -1.21
GTF3C1-213ENST00000571886 C2orf50Q96LR7 162 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms