RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 DCANP1Q8TF63 244 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 GLMPQ8WWB7 406 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 ACY3Q96HD9 319 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 SLC35E1Q96K37 410 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 CIB3Q96Q77 187 aaPredicted RBP7.14□□□□□ -1.27
CIITA-207ENST00000571545 HRH4Q9H3N8 390 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 NRN1Q9NPD7 142 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 MRPL36Q9P0J6 103 aaKnown RBP7.14□□□□□ -1.27
CIITA-207ENST00000571545 FBXL17Q9UF56 701 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 U3KQE9 123 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 STARD9Q9P2P6 4700 aa7.14□□□□□ -1.27
CIITA-207ENST00000571545 LYSTQ99698 3801 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 RYR2Q92736 4967 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 ZFP92A6NM28 416 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 CFDP00746 253 aaPredicted RBP7.13□□□□□ -1.27
CIITA-207ENST00000571545 GPX4P36969 197 aaPredicted RBP7.13□□□□□ -1.27
CIITA-207ENST00000571545 KLF9Q13886 244 aaPredicted RBP7.13□□□□□ -1.27
CIITA-207ENST00000571545 PYDC2Q56P42 97 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 C16orf54Q6UWD8 224 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 SIGLEC15Q6ZMC9 328 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 LILRB2Q8N423 598 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 NPIPB3Q92617 1050 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 RNF125Q96EQ8 232 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 SOSTQ9BQB4 213 aa7.13□□□□□ -1.27
CIITA-207ENST00000571545 CCDC160A6NGH7 325 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 BUB3O43684 328 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 NXPH3O95157 252 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 VAMP1P23763 118 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 UBE2MP61081 183 aaKnown RBP7.12□□□□□ -1.27
CIITA-207ENST00000571545 SUPT4H1P63272 117 aaKnown RBP7.12□□□□□ -1.27
CIITA-207ENST00000571545 EWSR1Q01844 656 aaKnown RBP eCLIP7.12□□□□□ -1.27
CIITA-207ENST00000571545 USF2Q15853 346 aaPredicted RBP7.12□□□□□ -1.27
CIITA-207ENST00000571545 MLANAQ16655 118 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 PSMG4Q5JS54 123 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 ACTL10Q5JWF8 245 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 SPANXN2Q5MJ10 180 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 C1orf194Q5T5A4 169 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 LGALS9CQ6DKI2 356 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 LYZL2Q7Z4W2 148 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 TMED4Q7Z7H5 227 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 FAM24BQ8N5W8 94 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 LRTM2Q8N967 370 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 C2CD4CQ8TF44 421 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 RBKSQ9H477 322 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 TMED3Q9Y3Q3 217 aa7.12□□□□□ -1.27
CIITA-207ENST00000571545 ZNF705EA8MWA4 302 aaPredicted RBP7.11□□□□□ -1.27
CIITA-207ENST00000571545 PSG1P11464 419 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 ID1P41134 155 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 NKX2-1P43699 371 aaPredicted RBP7.11□□□□□ -1.27
CIITA-207ENST00000571545 INPP1P49441 399 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 SPATA31B1PQ5VZV4 182 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 TRIM63Q969Q1 353 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 PBDC1Q9BVG4 233 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 TBC1D24Q9ULP9 559 aa7.11□□□□□ -1.27
CIITA-207ENST00000571545 NAP1L6A6NFF2 107 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 SNRPGP15A8MWD9 76 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 ZNF701M0R085 212 aaPredicted RBP7.1□□□□□ -1.27
CIITA-207ENST00000571545 PSMB3P49720 205 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 MEOX2P50222 304 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 GGNBP1Q5YKI7 109 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 Q8NAQ8 132 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 TMEM170AQ8WVE7 144 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 PPP1R14BQ96C90 147 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 RAB40CQ96S21 281 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 TRGV9Q99603 122 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 SLC45A2Q9UMX9 530 aa7.1□□□□□ -1.27
CIITA-207ENST00000571545 DYNC2H1Q8NCM8 4307 aaKnown RBP7.09□□□□□ -1.27
CIITA-207ENST00000571545 AGRNO00468 2067 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 TRAV10A0A0B4J240 114 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 IGHV4-28A0A0C4DH34 117 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 TEX48A0A1B0GUV7 120 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 TMEM189A5PLL7 270 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 KNCNA6PVL3 124 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 PITX3O75364 302 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 SFT2D2O95562 160 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 HLA-DRB4P13762 266 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 C4BPBP20851 252 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 NANOS2P60321 138 aaKnown RBP7.09□□□□□ -1.27
CIITA-207ENST00000571545 LYZP61626 148 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 GAMTQ14353 236 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 S100A7AQ86SG5 101 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 COQ8AQ8NI60 647 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 CLUHP3Q96NS8 147 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 GPR82Q96P67 336 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 PRR13Q9NZ81 148 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 PAIP2BQ9ULR5 123 aaKnown RBP7.09□□□□□ -1.27
CIITA-207ENST00000571545 V9GYH0 126 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 HLA-DRB4X5D2U9 266 aa7.09□□□□□ -1.27
CIITA-207ENST00000571545 H3BMM0 161 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 ISLRO14498 428 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 SYNGR2O43760 224 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 GALR1P47211 349 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 ZNF79Q15937 498 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 TRIQKQ629K1 86 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 FOXI2Q6ZQN5 318 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 OR8I2Q8N0Y5 310 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
CIITA-207ENST00000571545 SMIM9A6NGZ8 99 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 CENPXA8MT69 81 aa7.07□□□□□ -1.28
CIITA-207ENST00000571545 WRBO00258 174 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms