RNA–Protein interactions for RNA: ENST00000570279.1

CFDP1-210, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-210ENST00000570279 PRSS22Q9GZN4 317 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 TMEM191AQ9H0A3 160 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 RNASE7Q9H1E1 156 aaKnown RBP3.31□□□□□ -1.88
CFDP1-210ENST00000570279 ARRDC1-AS1Q9H2J1 176 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 RPP21Q9H633 154 aaKnown RBP3.31□□□□□ -1.88
CFDP1-210ENST00000570279 TNFRSF19Q9NS68 423 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 ZNF355PQ9NSJ1 428 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 KAAG1Q9UBP8 84 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 HSPB8Q9UJY1 196 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 EPDR1Q9UM22 224 aa3.31□□□□□ -1.88
CFDP1-210ENST00000570279 PDE4DIPQ5VU43 2346 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 TRAV30A0A087WSZ9 112 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 IGHV3-64DA0A0J9YX35 117 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 A0A1B0GUS0 222 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 C19orf71A6NCJ1 209 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 C2orf70A6NJV1 201 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 SRRM4A7MD48 611 aaKnown RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 K7EQM0 130 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 M0R1B8 84 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 M0R2Z0 102 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 CDX4O14627 284 aaPredicted RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 ACTL6BO94805 426 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 LTAP01374 205 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 P01737 135 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 IGHV1-46P01743 117 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 RBP4P02753 201 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 NBEAP1P0C6P0 100 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 NHLRC4P0CG21 123 aaPredicted RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 SP9P0CG40 484 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 S100A7P31151 101 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 CASP6P55212 293 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 TNXAQ16473 311 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 LTC4SQ16873 150 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 TDRG1Q3Y452 100 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 LEMD1Q68G75 181 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 MRPL54Q6P161 138 aaKnown RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 RBPMS2Q6ZRY4 209 aaKnown RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 MUC15Q8N387 334 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 NUP35Q8NFH5 326 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 OR9G1Q8NH87 305 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 C8orf46Q8TAG6 207 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 ITLN1Q8WWA0 313 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 FXYD5Q96DB9 178 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 SNRNP40Q96DI7 357 aaKnown RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 DAZAP1Q96EP5 407 aaKnown RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 HARBI1Q96MB7 349 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 FAM103A1Q9BTL3 118 aaKnown RBP3.3□□□□□ -1.88
CFDP1-210ENST00000570279 HINT2Q9BX68 163 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 CLEC7AQ9BXN2 247 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 ASCL3Q9NQ33 180 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 OTORQ9NRC9 128 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 WASHC3Q9Y3C0 194 aa3.3□□□□□ -1.88
CFDP1-210ENST00000570279 TDRD6O60522 2096 aaKnown RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 MPDZO75970 2070 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 UTRNP46939 3433 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PPIAL4EA0A075B759 164 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 IGHV3OR15-7A0A075B7D8 119 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 IGHV2-70DA0A0C4DH43 119 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 IGLC7A0M8Q6 106 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 DNAJC9-AS1A6NH13 148 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 HIGD1CA8MV81 97 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PPIAL4DF5H284 164 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 SYS1-DBNDD2H3BUS1 97 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 TNFRSF13BO14836 293 aaPredicted RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 SPRY3O43610 288 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 NDUFB3O43676 98 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 LEPROTL1O95214 131 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 IGKV1-16P04430 117 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 TCRAP04437 139 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 SLC25A5P05141 298 aaKnown RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PPIAL4FP0DN26 164 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 HNF1AP20823 631 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 CEACAM8P31997 349 aaPredicted RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 CCL11P51671 97 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 RHOGP84095 191 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 HOXA4Q00056 320 aaPredicted RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 SLAQ13239 276 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 RIGQ13278 110 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 FXYD3Q14802 87 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 SAPCD1Q5SSQ6 148 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 C1orf185Q5T7R7 199 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 SLC25A34Q6PIV7 304 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 ZNF474Q6S9Z5 364 aaPredicted RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 C16orf54Q6UWD8 224 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PATE2Q6UY27 113 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 LINC00305Q7Z4B0 112 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 NPIPB3Q92617 1050 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 ST6GALNAC6Q969X2 333 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 RCHY1Q96PM5 261 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PRR25Q96S07 402 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 MAP1LC3CQ9BXW4 147 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 NPFFR1Q9GZQ6 430 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PPIAL4AQ9Y536 164 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 R4GN57 208 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 TRANK1O15050 2925 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PHF3Q92576 2039 aaKnown RBP3.29□□□□□ -1.88
CFDP1-210ENST00000570279 PCDH15Q96QU1 1955 aa3.29□□□□□ -1.88
CFDP1-210ENST00000570279 CHD7Q9P2D1 2997 aa3.28□□□□□ -1.88
CFDP1-210ENST00000570279 ALPK2Q86TB3 2170 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms