RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 CITED2Q99967 270 aaPredicted RBP11.9□□□□□ -0.5
HERPUD1-219ENST00000570273 SLC39A9Q9NUM3 307 aa11.9□□□□□ -0.5
HERPUD1-219ENST00000570273 IGHV3-35A0A0C4DH35 117 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 A0A1W2PRX2 142 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 BMPR1BO00238 502 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 PSG1P11464 419 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 RELQ04864 619 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 AWAT1Q58HT5 328 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 FAM74A1Q5RGS3 127 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 AKR1C8PQ5T2L2 129 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 TEX261Q6UWH6 196 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 ZNF600Q6ZNG1 722 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 Q8WTZ3 238 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 WFDC12Q8WWY7 111 aa11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 TSSC4Q9Y5U2 329 aaPredicted RBP11.89□□□□□ -0.51
HERPUD1-219ENST00000570273 GGCTO75223 188 aaKnown RBP11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 IFNA7P01567 189 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 KRTAP10-3P60369 221 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 LYZP61626 148 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 SERF2P84101 59 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 ZNF680Q8NEM1 530 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 OR51G1Q8NGK1 321 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 C19orf24Q9BVV8 132 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 DOK5Q9P104 306 aa11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 PUS1Q9Y606 427 aaKnown RBP eCLIP11.88□□□□□ -0.51
HERPUD1-219ENST00000570273 I3L521 148 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 COX7A2P2O60397 106 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 YIF1AO95070 293 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 IL4P05112 153 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 RAB2AP61019 212 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 IFITM2Q01629 132 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 GCSAMLQ5JQS6 135 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 Q6ZRG5 221 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 PBDC1Q9BVG4 233 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 UBQLN2Q9UHD9 624 aa11.87□□□□□ -0.51
HERPUD1-219ENST00000570273 IGHV4OR15-8A0A075B7B6 117 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 A0A087WW49 117 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 COL6A5A8TX70 2615 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 UMAD1C9J7I0 102 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 OR2C1O95371 312 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 MBP02144 154 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 HSPB1P04792 205 aaKnown RBP11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 ORM2P19652 201 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 RPEL1Q2QD12 228 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 DEFB136Q30KP8 78 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 TMEM41BQ5BJD5 291 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 C8orf86Q6ZUL3 223 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 OR1B1Q8NGR6 318 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 RNF125Q96EQ8 232 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 VSIRQ9H7M9 311 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 PLA2G2EQ9NZK7 142 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 OR5G3P0C626 314 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 M6PRP20645 277 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 SULT1A2P50226 295 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 TOMM20LQ6UXN7 152 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 OR1L4Q8NGR5 311 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 DPF1Q92782 380 aa11.86□□□□□ -0.51
HERPUD1-219ENST00000570273 IGHV3OR16-8A0A075B7F1 116 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 WI2-2373I1.2A0A1W2PRP0 233 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 LINC01619G3V211 115 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 NDUFA4O00483 81 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 HYPMO75409 117 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 NSUN5P1Q3KNT7 163 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 PXDC1Q5TGL8 231 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 FAM122CQ6P4D5 195 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 ZNF767PQ75MW2 155 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 OR10G4Q8NGN3 311 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 OR10G9Q8NGN4 311 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 OR10G7Q8NGN6 311 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 FAM213BQ8TBF2 198 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 ZNF414Q96IQ9 312 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 PFDN5Q99471 154 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 ZFAND3Q9H8U3 227 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 RPRMQ9NS64 109 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
HERPUD1-219ENST00000570273 ZP3P21754 424 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 HOXD3P31249 432 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 RAB5CP51148 216 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 PLP1P60201 277 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 USF2Q15853 346 aaPredicted RBP11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 NDUFA11Q86Y39 141 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 OR11H1Q8NG94 326 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 OR1N2Q8NGR9 330 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 RNF141Q8WVD5 230 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 TMEM158Q8WZ71 300 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 C20orf24Q9BUV8 137 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 SLC25A22Q9H936 323 aa11.84□□□□□ -0.51
HERPUD1-219ENST00000570273 FHITP49789 147 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 FAM106AQ4KMX7 169 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 DPPA3Q6W0C5 159 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 GATAD1Q8WUU5 269 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 TMEM190Q8WZ59 177 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 DUX3Q96PT4 197 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 DNAJC4Q9NNZ3 241 aa11.83□□□□□ -0.52
HERPUD1-219ENST00000570273 ELOA3CA0A087WX78 387 aaPredicted RBP11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 A0A1W2PPV4 95 aa11.82□□□□□ -0.52
HERPUD1-219ENST00000570273 ZNF320A2RRD8 509 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms