RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 KLF17Q5JT82 389 aaPredicted RBP9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 ST6GALNAC6Q969X2 333 aa9.36□□□□□ -0.91
PDXDC1-217ENST00000570001 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 PFN1P07737 140 aaKnown RBP9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 GOLT1AQ6ZVE7 132 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 Q9H3A6 140 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 FBXL7Q9UJT9 491 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 IGLV1-47P01700 117 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 PMCHP20382 165 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 IMMP2LQ96T52 175 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 E7EUB6 86 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 IQCJQ1A5X6 159 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 IGLC7A0M8Q6 106 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 A8MWL6 223 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 ZNF137PP52743 207 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 CX3CL1P78423 397 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 FOXL1Q12952 345 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 PVRIGQ6DKI7 326 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 RNF125Q96EQ8 232 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 EPDR1Q9UM22 224 aa9.35□□□□□ -0.91
PDXDC1-217ENST00000570001 M0QZ24 198 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 BMPR1BO00238 502 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 HSBP1O75506 76 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 APCSP02743 223 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 DLX6P56179 175 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.34□□□□□ -0.912e-7■■■■■ 28.2
PDXDC1-217ENST00000570001 GBGT1Q8N5D6 347 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 GRIFINA4D1Z8 144 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 PRSS46E5RG02 174 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 GGCTO75223 188 aaKnown RBP9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 SSBP2P81877 361 aaPredicted RBP9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 PLXNB1O43157 2135 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 GFI1BQ5VTD9 330 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 SRSF8Q9BRL6 282 aaKnown RBP9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 OSTCQ9NRP0 149 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 RABAC1Q9UI14 185 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 LY96Q9Y6Y9 160 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 IGKV1OR2-108A0A075B7D4 117 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 NDUFS6O75380 124 aaKnown RBP9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 HLA-DQA1P01909 254 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 KRTDAPP60985 99 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
PDXDC1-217ENST00000570001 A6NNC1 897 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 RPL7P18124 248 aaKnown RBP9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 CDC42EP3Q9UKI2 254 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 TRBV9A0A0B4J1U6 114 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 AMY1AP04745 511 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 AMTP48728 403 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 ATG101Q9BSB4 218 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 SLC25A2Q9BXI2 301 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 ACACBO00763 2458 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 ISLRO14498 428 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 NPPCP23582 126 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 GPR82Q96P67 336 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 PRO1933Q9H354 126 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 GGTLC3B5MD39 225 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 SIAH2O43255 324 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 LY6EQ16553 131 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 ZNF841Q6ZN19 808 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 ZNF600Q6ZNG1 722 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 SLC25A39Q9BZJ4 359 aaPredicted RBP9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 FAM208BQ5VWN6 2430 aa9.33□□□□□ -0.92
PDXDC1-217ENST00000570001 MGAQ8IWI9 3026 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 HLA-DRB1P01911 266 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 THAP8Q8NA92 274 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 FMC1Q96HJ9 113 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 SERTM2A0A1B0GWG4 89 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 GPR183P32249 361 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 TOMM20LQ6UXN7 152 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 OR11H6Q8NGC7 330 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 TMEM116Q8NCL8 245 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 TBL2Q9Y4P3 447 aaKnown RBP9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 FREM2Q5SZK8 3169 aa9.32□□□□□ -0.92
PDXDC1-217ENST00000570001 IGHV3OR16-8A0A075B7F1 116 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 INS-IGF2F8WCM5 200 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 RNASEKQ6P5S7 137 aaKnown RBP9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 ZNF562Q6V9R5 426 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 HIST3H2BBQ8N257 126 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 GRAMD2BQ96HH9 432 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 LINC00479Q96M42 142 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 SAA4P35542 130 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 FAM162BQ5T6X4 162 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 C11orf52Q96A22 123 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 NOL4LQ96MY1 436 aaPredicted RBP9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 TRAV20A0A0B4J274 112 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 TMEM8BA6NDV4 472 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 IGHV2-5P01817 119 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 CDSNQ15517 529 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 IGFBPL1Q8WX77 278 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 C7orf69Q9H7B7 122 aa9.31□□□□□ -0.92
PDXDC1-217ENST00000570001 IGHV2-70DA0A0C4DH43 119 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 CA1P00915 261 aaPredicted RBP9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 PSG9Q00887 426 aa9.3□□□□□ -0.92
PDXDC1-217ENST00000570001 ZNF329Q86UD4 541 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms