RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 U3KQ87 197 aa10.09□□□□□ -0.79
GTF3C1-211ENST00000569653 U3KQE9 123 aa10.09□□□□□ -0.79
GTF3C1-211ENST00000569653 TRAV30A0A087WSZ9 112 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 TRAV2A0A0B4J234 112 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 PITX3O75364 302 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 MED6O75586 246 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 CA1P00915 261 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 HOXB5P09067 269 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 OR4E1P0C645 316 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 IGLC1P0CG04 106 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 C4BPBP20851 252 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 ATP5IP56385 69 aaPredicted RBP10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 DHRS2Q13268 280 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 C4orf46Q504U0 113 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 PRSS54Q6PEW0 395 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 DCANP1Q8TF63 244 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 GATAD1Q8WUU5 269 aa10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 C11orf68Q9H3H3 251 aaKnown RBP10.08□□□□□ -0.8
GTF3C1-211ENST00000569653 HECTD4Q9Y4D8 3996 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 HERC2O95714 4834 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 TRAV6A0A075B6T7 132 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 KNCNA6PVL3 124 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 P2RY1P47900 373 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 PRR20EP86478 221 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 PRR20CP86479 221 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 PRR20DP86480 221 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 PRR20BP86481 221 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 PRR20AP86496 221 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 GGNBP1Q5YKI7 109 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 NRARPQ7Z6K4 114 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 Q8NAQ8 132 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 NUDT15Q9NV35 164 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 RABAC1Q9UI14 185 aa10.07□□□□□ -0.8
GTF3C1-211ENST00000569653 FAM240BA0A1B0GVZ2 78 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 DNASE2O00115 360 aaPredicted RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 IFNA21P01568 189 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 IFNA4P05014 189 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 ZNF688P0C7X2 276 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 RBMY1A1P0DJD3 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 RBMY1CP0DJD4 496 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 NPPCP23582 126 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 RND2P52198 227 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 CMC4P56277 68 aaPredicted RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 RPL11P62913 178 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 RBMY1FQ15415 496 aaKnown RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 USF2Q15853 346 aaPredicted RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 MZT2BQ6NZ67 158 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 STXBP6Q8NFX7 210 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 OR1S2Q8NGQ3 325 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 GLMPQ8WWB7 406 aa10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 CIB3Q96Q77 187 aaPredicted RBP10.06□□□□□ -0.8
GTF3C1-211ENST00000569653 CD5P06127 495 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 H2AFB2P0C5Z0 115 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 RAB11AP62491 216 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 PAFAH1B2P68402 229 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 RPP30P78346 268 aaKnown RBP10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 TMEM217Q8N7C4 229 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 METTL26Q96S19 204 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 TMEM231Q9H6L2 316 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 FBXL17Q9UF56 701 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 X6R8D5 127 aa10.05□□□□□ -0.8
GTF3C1-211ENST00000569653 SYNGR2O43760 224 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 ADAP1O75689 374 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 IAPPP10997 89 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 OR10J1P30954 320 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 C16orf54Q6UWD8 224 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 GSG1LQ6UXU4 331 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 C11orf45Q8TAV5 145 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 ACY3Q96HD9 319 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 NARS2Q96I59 477 aaKnown RBP10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 SEC22CQ9BRL7 303 aa10.04□□□□□ -0.8
GTF3C1-211ENST00000569653 IGHV4-28A0A0C4DH34 117 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 GPX4P36969 197 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 YPEL3P61236 119 aaPredicted RBP10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 LGALS9CQ6DKI2 356 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 CSNK1G2-AS1Q8NCQ2 148 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 ENKURQ8TC29 256 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 Q8WTZ3 238 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 MITD1Q8WV92 249 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 NPIPB3Q92617 1050 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 GRAMD2BQ96HH9 432 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 SLC35E1Q96K37 410 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 MAGT1Q9H0U3 335 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 CLEC5AQ9NY25 188 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 PAIP2BQ9ULR5 123 aaKnown RBP10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 DNAH17Q9UFH2 4485 aa10.03□□□□□ -0.8
GTF3C1-211ENST00000569653 ELOA3CA0A087WX78 387 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 A0A1W2PS18 150 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 WRBO00258 174 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 NKX2-1P43699 371 aaPredicted RBP10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 DEFA1P59665 94 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 DEFA3P59666 94 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 DEFB1P60022 68 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 ACTL10Q5JWF8 245 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 STHQ8IWL8 128 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
GTF3C1-211ENST00000569653 FAT2Q9NYQ8 4349 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms