RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 ZNF736B4DX44 427 aaPredicted RBP4.74□□□□□ -1.65
LINC00556-201ENST00000569603 KRBOX1C9JBD0 128 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 I3L521 148 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 HSPB6O14558 160 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 HSD17B6O14756 317 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 GEMIN2O14893 280 aaKnown RBP4.74□□□□□ -1.65
LINC00556-201ENST00000569603 CDS2O95674 445 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 CLIC3O95833 236 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 LALBAP00709 142 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 IGKV1D-33P01593 117 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 IGKV1-33P01594 117 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 UBBP0CG47 229 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 NFYBP25208 207 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 PSMB8P28062 276 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 MYCNOSP40205 109 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 FCN2Q15485 313 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 FAM162BQ5T6X4 162 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 ASPHD1Q5U4P2 390 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 SPSB3Q6PJ21 355 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 TEX261Q6UWH6 196 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 DHRS11Q6UWP2 260 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 ZNF497Q6ZNH5 498 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 LINC01551Q86U37 167 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 ZNF695Q8IW36 515 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 LINC01561Q8N1V8 128 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 C9orf62Q8N4C0 152 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 LRTM2Q8N967 370 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 OR5AK2Q8NH90 309 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 RFESDQ8TAC1 157 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 RTN4IP1Q8WWV3 396 aaPredicted RBP4.74□□□□□ -1.65
LINC00556-201ENST00000569603 DIRAS2Q96HU8 199 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 RASL11BQ9BPW5 248 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 C20orf144Q9BQM9 153 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 FAAP24Q9BTP7 215 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 TAS2R4Q9NYW5 299 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 LINC00527Q9UJ94 153 aa4.74□□□□□ -1.65
LINC00556-201ENST00000569603 AMMECR1Q9Y4X0 333 aaPredicted RBP4.74□□□□□ -1.65
LINC00556-201ENST00000569603 TRBV5-7A0A0A0MS05 114 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 A0A1W2PP11 408 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 C12orf77C9JDV5 145 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 CDRT1O95170 752 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ESDP10768 282 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 PSG1P11464 419 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 RUNX1Q01196 453 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 RBM39Q14498 530 aaKnown RBP4.73□□□□□ -1.65
LINC00556-201ENST00000569603 OPCMLQ14982 345 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 CT45A1Q5HYN5 189 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 FAM27D1Q5T7N8 215 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ZFAND6Q6FIF0 208 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ADAMTSL5Q6ZMM2 481 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 LINC00596Q86U02 117 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ODF3L1Q8IXM7 274 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 C15orf54Q8N8G6 183 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ZNRF2Q8NHG8 242 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 CT45A3Q8NHU0 189 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ZNF502Q8TBZ5 544 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ASB13Q8WXK3 278 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 PGLYRP3Q96LB9 341 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 AGMATQ9BSE5 352 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 TMEM59Q9BXS4 323 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 RNF167Q9H6Y7 350 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 COMMD9Q9P000 198 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 METTL1Q9UBP6 276 aaKnown RBP4.73□□□□□ -1.65
LINC00556-201ENST00000569603 ST3GAL6Q9Y274 331 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 EXOSC1Q9Y3B2 195 aaKnown RBP4.73□□□□□ -1.65
LINC00556-201ENST00000569603 U3KQ87 197 aa4.73□□□□□ -1.65
LINC00556-201ENST00000569603 KMT2AQ03164 3969 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 IGHV3-72A0A0B4J1Y9 119 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 LOC100130705A0A1B0GUX0 176 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 TMEM30CPA0ZSE6 113 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 TMEM189A5PLL7 270 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 GNG7O60262 68 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 ELANEP08246 267 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 FGF7P21781 194 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 REG1BP48304 166 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 CX3CL1P78423 397 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 OXA1LQ15070 435 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 SRSF7Q16629 238 aaKnown RBP eCLIP4.72□□□□□ -1.65
LINC00556-201ENST00000569603 MPV17LQ2QL34 196 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 DEFB136Q30KP8 78 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 PHLDA2Q53GA4 152 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 LAIR2Q6ISS4 152 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 RPL22L1Q6P5R6 122 aaKnown RBP4.72□□□□□ -1.65
LINC00556-201ENST00000569603 C5orf24Q7Z6I8 188 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 SLC35E3Q7Z769 313 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 FAM24BQ8N5W8 94 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 KLHL30-AS1Q8NEE0 82 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 OR2K2Q8NGT1 345 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 UBALD1Q8TB05 177 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 TMED6Q8WW62 240 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 TMEM106AQ96A25 262 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 RITA1Q96K30 269 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 RDH12Q96NR8 316 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 SLC25A39Q9BZJ4 359 aaPredicted RBP4.72□□□□□ -1.65
LINC00556-201ENST00000569603 CARHSP1Q9Y2V2 147 aaKnown RBP4.72□□□□□ -1.65
LINC00556-201ENST00000569603 KLF12Q9Y4X4 402 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 DNAH10Q8IVF4 4471 aa4.72□□□□□ -1.65
LINC00556-201ENST00000569603 A0A087WX48 190 aa4.71□□□□□ -1.66
LINC00556-201ENST00000569603 CORTO00230 105 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms