RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 TECRQ9NZ01 308 aaKnown RBP7.07□□□□□ -1.28
LINC00558-201ENST00000569422 MRPL36Q9P0J6 103 aaKnown RBP7.07□□□□□ -1.28
LINC00558-201ENST00000569422 ZNF257Q9Y2Q1 563 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 ASH1LQ9NR48 2969 aaKnown RBP7.07□□□□□ -1.28
LINC00558-201ENST00000569422 CNN1P51911 297 aaKnown RBP7.07□□□□□ -1.28
LINC00558-201ENST00000569422 UBE2L3P68036 154 aaKnown RBP7.07□□□□□ -1.28
LINC00558-201ENST00000569422 RPL19P84098 196 aaKnown RBP7.07□□□□□ -1.28
LINC00558-201ENST00000569422 POU2AF1Q16633 256 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 OR5AU1Q8NGC0 362 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 OR5AN1Q8NGI8 311 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 BLNKQ8WV28 456 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 ZNF503Q96F45 646 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 DUX5Q96PT3 197 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 NDUFAF3Q9BU61 184 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 DCHS2Q6V1P9 2916 aa7.07□□□□□ -1.28
LINC00558-201ENST00000569422 COX7A2P2O60397 106 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 CA1P00915 261 aaPredicted RBP7.06□□□□□ -1.28
LINC00558-201ENST00000569422 IGHV1-8P0DP01 117 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 CD24P25063 80 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 IER3P46695 156 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 C2orf83Q53S99 150 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 ACTL10Q5JWF8 245 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 OR8I2Q8N0Y5 310 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 WASHC3Q9Y3C0 194 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 GGTLC3B5MD39 225 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 DLL1O00548 723 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 TOX4O94842 621 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 USF1P22415 310 aaPredicted RBP7.06□□□□□ -1.28
LINC00558-201ENST00000569422 SRSF2Q01130 221 aaKnown RBP7.06□□□□□ -1.28
LINC00558-201ENST00000569422 PRR27Q6MZM9 219 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 CHRDL1Q9BU40 450 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 LINC00574Q9H8X3 128 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 CGB1A6NKQ9 187 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 SIAH2O43255 324 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 NUPR1O60356 82 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 ADMP35318 185 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 PLGLAQ15195 96 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 KIAA1644Q3SXP7 199 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 MUC15Q8N387 334 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 OR1B1Q8NGR6 318 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 SRSF8Q9BRL6 282 aaKnown RBP7.06□□□□□ -1.28
LINC00558-201ENST00000569422 INSIG2Q9Y5U4 225 aa7.06□□□□□ -1.28
LINC00558-201ENST00000569422 A0A1W2PPI3 338 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 K7ENP7 123 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 CCL21O00585 134 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 C8orf88P0DMB2 117 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 TAS2R45P59539 299 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 RANP62826 216 aaKnown RBP7.05□□□□□ -1.28
LINC00558-201ENST00000569422 CDSNQ15517 529 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 VMA21Q3ZAQ7 101 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM177Q53S58 311 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 SSBP3Q9BWW4 388 aaPredicted RBP7.05□□□□□ -1.28
LINC00558-201ENST00000569422 DNAJC4Q9NNZ3 241 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM167BQ9NRX6 74 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 ZNF355PQ9NSJ1 428 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 RAXQ9Y2V3 346 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 DSCAML1Q8TD84 2053 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 FCN1O00602 326 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 PPOXP50336 477 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 MRPL54Q6P161 138 aaKnown RBP7.05□□□□□ -1.28
LINC00558-201ENST00000569422 NRGNQ92686 78 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 SLC25A33Q9BSK2 321 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM133Q9H2Q1 129 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 JKAMPQ9P055 326 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 COL12A1Q99715 3063 aa7.05□□□□□ -1.28
LINC00558-201ENST00000569422 SCGB1A1P11684 91 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 GNG5P63218 68 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 TIGITQ495A1 244 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM155Q4W5P6 130 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 C10orf113Q5VZT2 155 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 PDPNQ86YL7 162 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 ST6GALNAC3Q8NDV1 305 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 OR1L6Q8NGR2 347 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 VSTM2AQ8TAG5 236 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 FBXL15Q9H469 300 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 HILPDAQ9Y5L2 63 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 ARHGAP32A7KAX9 2087 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 TANC2Q9HCD6 1990 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 SNURFLB1AK76 121 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 IGLV2-23P01705 113 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 GZMBP10144 247 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM116Q8NCL8 245 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 TMEM167AQ8TBQ9 72 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 TXNDC17Q9BRA2 123 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 ZNF835Q9Y2P0 537 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 S4R3C0 116 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 IGHV2-26A0A0B4J1V2 119 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 PPIAL4CA0A0B4J2A2 164 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 PPIAL4GP0DN37 164 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 RAB9AP51151 201 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 SUB1P53999 127 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC00558-201ENST00000569422 RPL15P61313 204 aaKnown RBP7.04□□□□□ -1.28
LINC00558-201ENST00000569422 SELENOTP62341 195 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 LCN2P80188 198 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 LINC00305Q7Z4B0 112 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 C11orf42Q8N5U0 333 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 ST6GALNAC6Q969X2 333 aa7.04□□□□□ -1.28
LINC00558-201ENST00000569422 SLC25A2Q9BXI2 301 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms