RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 OR51G1Q8NGK1 321 aa14.93□□□□□ -0.02
CLK3-225ENST00000569063 COQ8AQ8NI60 647 aa14.93□□□□□ -0.02
CLK3-225ENST00000569063 MAGT1Q9H0U3 335 aa14.93□□□□□ -0.02
CLK3-225ENST00000569063 ZFP92A6NM28 416 aa14.92□□□□□ -0.02
CLK3-225ENST00000569063 BUB3O43684 328 aa14.92□□□□□ -0.02
CLK3-225ENST00000569063 ADAP1O75689 374 aa14.92□□□□□ -0.02
CLK3-225ENST00000569063 LEMD1Q68G75 181 aa14.92□□□□□ -0.02
CLK3-225ENST00000569063 RNF125Q96EQ8 232 aa14.92□□□□□ -0.02
CLK3-225ENST00000569063 WRBO00258 174 aa14.91□□□□□ -0.02
CLK3-225ENST00000569063 PLA2G10O15496 165 aa14.91□□□□□ -0.02
CLK3-225ENST00000569063 ANXA7P20073 488 aaKnown RBP14.91□□□□□ -0.02
CLK3-225ENST00000569063 ID3Q02535 119 aa14.91□□□□□ -0.02
CLK3-225ENST00000569063 ZNF90Q03938 601 aa14.91□□□□□ -0.02
CLK3-225ENST00000569063 STARD9Q9P2P6 4700 aa14.91□□□□□ -0.02
CLK3-225ENST00000569063 A0A0J9YWU9 116 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 LCE6AA0A183 80 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 PRSS46E5RG02 174 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 IFNA21P01568 189 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 FABP1P07148 127 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 C4orf46Q504U0 113 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 OR8G2PQ6IF36 304 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 GATAD1Q8WUU5 269 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 TRGV9Q99603 122 aa14.9□□□□□ -0.02
CLK3-225ENST00000569063 PAIP2BQ9ULR5 123 aaKnown RBP14.9□□□□□ -0.02
CLK3-225ENST00000569063 ATF4P18848 351 aaPredicted RBP14.89□□□□□ -0.03
CLK3-225ENST00000569063 NUP62P37198 522 aaPredicted RBP14.89□□□□□ -0.03
CLK3-225ENST00000569063 SPANXN5Q5MJ07 72 aa14.89□□□□□ -0.03
CLK3-225ENST00000569063 STHQ8IWL8 128 aa14.89□□□□□ -0.03
CLK3-225ENST00000569063 THAP8Q8NA92 274 aa14.89□□□□□ -0.03
CLK3-225ENST00000569063 OR4D5Q8NGN0 318 aa14.89□□□□□ -0.03
CLK3-225ENST00000569063 PFDN2Q9UHV9 154 aa14.89□□□□□ -0.03
CLK3-225ENST00000569063 IGKV1OR2-108A0A075B7D4 117 aa14.88□□□□□ -0.03
CLK3-225ENST00000569063 SNRPGP15A8MWD9 76 aa14.88□□□□□ -0.03
CLK3-225ENST00000569063 LYRM1O43325 122 aa14.88□□□□□ -0.03
CLK3-225ENST00000569063 ZNF688P0C7X2 276 aa14.88□□□□□ -0.03
CLK3-225ENST00000569063 SIGLEC15Q6ZMC9 328 aa14.88□□□□□ -0.03
CLK3-225ENST00000569063 LINC00299Q6ZSB3 139 aa14.88□□□□□ -0.03
CLK3-225ENST00000569063 SEPSECSQ9HD40 501 aaKnown RBP14.88□□□□□ -0.03
CLK3-225ENST00000569063 STRAPQ9Y3F4 350 aaKnown RBP14.88□□□□□ -0.03
CLK3-225ENST00000569063 NKX2-1P43699 371 aaPredicted RBP14.87□□□□□ -0.03
CLK3-225ENST00000569063 POLR2GP62487 172 aaKnown RBP eCLIP14.87□□□□□ -0.03
CLK3-225ENST00000569063 TRPT1Q86TN4 253 aaKnown RBP14.87□□□□□ -0.03
CLK3-225ENST00000569063 MITD1Q8WV92 249 aa14.87□□□□□ -0.03
CLK3-225ENST00000569063 PBDC1Q9BVG4 233 aa14.87□□□□□ -0.03
CLK3-225ENST00000569063 C20orf85Q9H1P6 137 aa14.87□□□□□ -0.03
CLK3-225ENST00000569063 NRN1Q9NPD7 142 aa14.87□□□□□ -0.03
CLK3-225ENST00000569063 TENM2Q9NT68 2774 aa14.87□□□□□ -0.03
CLK3-225ENST00000569063 CA1P00915 261 aaPredicted RBP14.86□□□□□ -0.03
CLK3-225ENST00000569063 EWSR1Q01844 656 aaKnown RBP eCLIP14.86□□□□□ -0.033e-7■□□□□ 11.1
CLK3-225ENST00000569063 CCDC32Q9BV29 185 aa14.86□□□□□ -0.03
CLK3-225ENST00000569063 H3BP45 60 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 CFDP00746 253 aaPredicted RBP14.85□□□□□ -0.03
CLK3-225ENST00000569063 LYZP61626 148 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 OR2F1Q13607 317 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 C1orf194Q5T5A4 169 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 TMEM217Q8N7C4 229 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 SMIM8Q96KF7 97 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 RARRES2Q99969 163 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 PSENENQ9NZ42 101 aa14.85□□□□□ -0.03
CLK3-225ENST00000569063 DYNC2H1Q8NCM8 4307 aaKnown RBP14.85□□□□□ -0.03
CLK3-225ENST00000569063 KNCNA6PVL3 124 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 TCRBP04435 133 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 SPP1P10451 314 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 SNRPD3P62318 126 aaKnown RBP14.84□□□□□ -0.03
CLK3-225ENST00000569063 TMEM41BQ5BJD5 291 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 PSMG4Q5JS54 123 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 MORN3Q6PF18 240 aaPredicted RBP14.84□□□□□ -0.03
CLK3-225ENST00000569063 OR11H2Q8NH07 326 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 RAB40CQ96S21 281 aa14.84□□□□□ -0.03
CLK3-225ENST00000569063 SSSCA1O60232 199 aa14.83□□□□□ -0.04
CLK3-225ENST00000569063 GIG44P09565 113 aaPredicted RBP14.83□□□□□ -0.04
CLK3-225ENST00000569063 IAH1Q2TAA2 248 aaPredicted RBP14.83□□□□□ -0.04
CLK3-225ENST00000569063 ACTL10Q5JWF8 245 aa14.83□□□□□ -0.04
CLK3-225ENST00000569063 FBXL17Q9UF56 701 aa14.83□□□□□ -0.04
CLK3-225ENST00000569063 PMS2P5A8MQ11 134 aa14.82□□□□□ -0.04
CLK3-225ENST00000569063 PAX9P55771 341 aa14.82□□□□□ -0.04
CLK3-225ENST00000569063 ACOT7LQ6ZUV0 252 aa14.82□□□□□ -0.04
CLK3-225ENST00000569063 TMEM144Q7Z5S9 345 aa14.82□□□□□ -0.04
CLK3-225ENST00000569063 ZBTB8BQ8NAP8 495 aaPredicted RBP14.82□□□□□ -0.04
CLK3-225ENST00000569063 SLC45A2Q9UMX9 530 aa14.82□□□□□ -0.04
CLK3-225ENST00000569063 LYSTQ99698 3801 aa14.81□□□□□ -0.04
CLK3-225ENST00000569063 CXorf65A6NEN9 183 aa14.81□□□□□ -0.04
CLK3-225ENST00000569063 TAS2R30P59541 319 aa14.81□□□□□ -0.04
CLK3-225ENST00000569063 AKR1C1Q04828 323 aa14.81□□□□□ -0.04
CLK3-225ENST00000569063 S100ZQ8WXG8 99 aa14.81□□□□□ -0.04
CLK3-225ENST00000569063 NUDT15Q9NV35 164 aa14.81□□□□□ -0.04
CLK3-225ENST00000569063 SACSQ9NZJ4 4579 aa14.8□□□□□ -0.04
CLK3-225ENST00000569063 TRAV6A0A075B6T7 132 aa14.8□□□□□ -0.04
CLK3-225ENST00000569063 TMEM14EPQ6UXP3 125 aa14.8□□□□□ -0.04
CLK3-225ENST00000569063 PPP1R14BQ96C90 147 aa14.8□□□□□ -0.04
CLK3-225ENST00000569063 C11orf68Q9H3H3 251 aaKnown RBP14.8□□□□□ -0.04
CLK3-225ENST00000569063 GSKIPQ9P0R6 139 aa14.8□□□□□ -0.04
CLK3-225ENST00000569063 NUPR2A6NF83 97 aa14.79□□□□□ -0.04
CLK3-225ENST00000569063 A6NHS1 94 aa14.79□□□□□ -0.04
CLK3-225ENST00000569063 JTBO76095 146 aa14.79□□□□□ -0.04
CLK3-225ENST00000569063 SCGB1D2O95969 90 aa14.79□□□□□ -0.04
CLK3-225ENST00000569063 C4BPBP20851 252 aa14.79□□□□□ -0.04
CLK3-225ENST00000569063 PMS2P11Q13670 270 aa14.79□□□□□ -0.04
CLK3-225ENST00000569063 TMEM182Q6ZP80 229 aaPredicted RBP14.79□□□□□ -0.04
CLK3-225ENST00000569063 OR8I2Q8N0Y5 310 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms