RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 CIARTQ8N365 385 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-250ENST00000568290 TMEM75Q8N9X5 138 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 NUP35Q8NFH5 326 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 C18orf32Q8TCD1 76 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF503Q96F45 646 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 VKORC1Q9BQB6 163 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 MS4A6AQ9H2W1 248 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 CBLN4Q9NTU7 201 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 ZNF835Q9Y2P0 537 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 SIGLEC9Q9Y336 463 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 GOLT1BQ9Y3E0 138 aa6.15□□□□□ -1.42
ATXN3-250ENST00000568290 IGHV2-26A0A0B4J1V2 119 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 A0A0G2JNJ9 132 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 A0A1W2PPI3 338 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 M0R1W7 72 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 IGLV2-23P01705 113 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 TCRAP04437 139 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 ZNF25P17030 456 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-250ENST00000568290 NTF3P20783 257 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 LOXP28300 417 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-250ENST00000568290 BMI1P35226 326 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 GPR6P46095 362 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-250ENST00000568290 TCL1AP56279 114 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 FAM201AQ5SY85 155 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 PRR27Q6MZM9 219 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 C12orf54Q6X4T0 127 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 OR10W1Q8NGF6 305 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 IGFBPL1Q8WX77 278 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 ZNF48Q96MX3 618 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-250ENST00000568290 FANCD2OSQ96PS1 177 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 ALKBH7Q9BT30 221 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-250ENST00000568290 Q9H3A6 140 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 CLEC5AQ9NY25 188 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 Q9UFV3 132 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 CDH23Q9H251 3354 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 CACNA1DQ01668 2161 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 MED13Q9UHV7 2174 aa6.14□□□□□ -1.43
ATXN3-250ENST00000568290 ZDBF2Q9HCK1 2354 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 PPIAL4CA0A0B4J2A2 164 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 IGHV1-3A0A0C4DH29 117 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 A0A1B0GUT8 65 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 A0A1B0GXF2 115 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 IGLC7A0M8Q6 106 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 BUB1B-PAK6H3BSN5 160 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 K7EM74 188 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 DLEU1O43261 78 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 LEPROTL1O95214 131 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 C3orf79P0CE67 100 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 PPIAL4GP0DN37 164 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 CCL3L1P16619 93 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 GATA2P23769 480 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-250ENST00000568290 HTR1DP28221 377 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 MFAP4P55083 255 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 FOXA3P55318 350 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-250ENST00000568290 DLX6P56179 175 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 RNASEKQ6P5S7 137 aaKnown RBP6.13□□□□□ -1.43
ATXN3-250ENST00000568290 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 NEU4Q8WWR8 484 aaPredicted RBP6.13□□□□□ -1.43
ATXN3-250ENST00000568290 MLST8Q9BVC4 326 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 PRSS22Q9GZN4 317 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 DPM3Q9P2X0 92 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 LAMTOR2Q9Y2Q5 125 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 DOCK11Q5JSL3 2073 aa6.13□□□□□ -1.43
ATXN3-250ENST00000568290 XIRP2A4UGR9 3374 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 IGKV1D-37A0A075B6S9 117 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 FAM186AA6NE01 2351 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 NPIPB6E9PJ23 425 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 CRXO43186 299 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-250ENST00000568290 TOX4O94842 621 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 IGLV1-47P01700 117 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 CRYGBP07316 175 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 SNRPCP09234 159 aaKnown RBP6.12□□□□□ -1.43
ATXN3-250ENST00000568290 IGLC2P0DOY2 106 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 IGLC3P0DOY3 106 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 PYYP10082 97 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 GP9P14770 177 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 RPL7P18124 248 aaKnown RBP6.12□□□□□ -1.43
ATXN3-250ENST00000568290 CAMPP49913 170 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 LYZP61626 148 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 LAMA3Q16787 3333 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 FBXL19-AS1Q494R0 122 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 PATE2Q6UY27 113 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 C1orf122Q6ZSJ8 110 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 FA2HQ7L5A8 372 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 NIT1Q86X76 327 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 SPACA3Q8IXA5 215 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 KIR3DL3Q8N743 410 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 ZNF738Q8NE65 137 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 BLNKQ8WV28 456 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 SRSF12Q8WXF0 261 aaKnown RBP6.12□□□□□ -1.43
ATXN3-250ENST00000568290 DPF1Q92782 380 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 SLC25A39Q9BZJ4 359 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-250ENST00000568290 FNDC4Q9H6D8 234 aaPredicted RBP6.12□□□□□ -1.43
ATXN3-250ENST00000568290 FBXL7Q9UJT9 491 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 TP53TG3Q9ULZ0 132 aa6.12□□□□□ -1.43
ATXN3-250ENST00000568290 HEATR1Q9H583 2144 aaKnown RBP6.11□□□□□ -1.43
ATXN3-250ENST00000568290 HCFC1P51610 2035 aa6.11□□□□□ -1.43
ATXN3-250ENST00000568290 PTPRBP23467 1997 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms