RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TTC9CQ8N5M4 171 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 OR5AU1Q8NGC0 362 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 OR51G1Q8NGK1 321 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 OR1L4Q8NGR5 311 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 SGMS2Q8NHU3 365 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 PIFOQ8TCI5 191 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 MS4A10Q96PG2 267 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 FANCD2OSQ96PS1 177 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 PFDN5Q99471 154 aa5.57□□□□□ -1.52
SMG1-215ENST00000568239 C7orf77A4D0Y5 90 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 SMAD7O15105 426 aaKnown RBP5.56□□□□□ -1.52
SMG1-215ENST00000568239 IGLC1P0CG04 106 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 C8orf88P0DMB2 117 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 IGHV4-31P0DP07 118 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 PSG1P11464 419 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 TRGV9Q99603 122 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 SMIM7Q9BQ49 75 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 C19orf24Q9BVV8 132 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 FBXL7Q9UJT9 491 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 IGLV11-55A0A075B6I3 123 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 CLN5O75503 358 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 RD3LP0DJH9 198 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 TAGLN2P37802 199 aaKnown RBP5.56□□□□□ -1.52
SMG1-215ENST00000568239 FAM90A2PQ658T7 463 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 LEMD1Q68G75 181 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 PATE2Q6UY27 113 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 WFDC11Q8NEX6 87 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 TVP23CQ96ET8 276 aa5.56□□□□□ -1.52
SMG1-215ENST00000568239 OR2T8A6NH00 312 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 DNASE2O00115 360 aaPredicted RBP5.55□□□□□ -1.52
SMG1-215ENST00000568239 HYPMO75409 117 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 NDUFB8O95169 186 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 PYYP10082 97 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 UBE2L3P68036 154 aaKnown RBP5.55□□□□□ -1.52
SMG1-215ENST00000568239 DEFB112Q30KQ8 113 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 PQLC2Q6ZP29 291 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 ANAPC16Q96DE5 110 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 C21orf62Q9NYP8 219 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 YTHDF2Q9Y5A9 579 aaKnown RBP5.55□□□□□ -1.52
SMG1-215ENST00000568239 UNC79Q9P2D8 2635 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 ELOA3CA0A087WX78 387 aaPredicted RBP5.55□□□□□ -1.52
SMG1-215ENST00000568239 IGHV3-35A0A0C4DH35 117 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 NDUFB4O95168 129 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 MFAP4P55083 255 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 PMS2P11Q13670 270 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 C15orf32Q32M92 178 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 C16orf82Q7Z2V1 217 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 ISOC2Q96AB3 205 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 RNF2Q99496 336 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 MRPL32Q9BYC8 188 aaKnown RBP5.55□□□□□ -1.52
SMG1-215ENST00000568239 PARLQ9H300 379 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 PITPNC1Q9UKF7 332 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 PSMB11A5LHX3 300 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 J3QLI3 93 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 TSPAN9O75954 239 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 IGKV1-17P01599 117 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 AMY1AP04745 511 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 IL4P05112 153 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 BLCAPP62952 87 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 RHOGP84095 191 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 ODF1Q14990 250 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 ADIRFQ15847 76 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 BLNKQ8WV28 456 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 ZNF503Q96F45 646 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 PAXXQ9BUH6 204 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 SLC25A2Q9BXI2 301 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 TMEM167BQ9NRX6 74 aa5.55□□□□□ -1.52
SMG1-215ENST00000568239 SCO2A0A1W2PP80 73 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 TMEM250H0YL14 139 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 PDE6DO43924 150 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 IGHV4-59P01825 116 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 FABP1P07148 127 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 SUMO1P63165 101 aaKnown RBP5.54□□□□□ -1.52
SMG1-215ENST00000568239 CYB5R2Q6BCY4 276 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 CIARTQ8N365 385 aaPredicted RBP5.54□□□□□ -1.52
SMG1-215ENST00000568239 FAM110DQ8TAY7 271 aaPredicted RBP5.54□□□□□ -1.52
SMG1-215ENST00000568239 DERL1Q9BUN8 251 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 OR51M1Q9H341 326 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 GNB4Q9HAV0 340 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 AURKAIP1Q9NWT8 199 aaPredicted RBP5.54□□□□□ -1.52
SMG1-215ENST00000568239 HIGD1AQ9Y241 93 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 MYO9AB2RTY4 2548 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 IGHV3OR16-8A0A075B7F1 116 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 TRAV41A0A0B4J266 112 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 GPR183P32249 361 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 RHEBQ15382 184 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 TMEM241Q24JQ0 296 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 SMUG1Q53HV7 270 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 KRTAP1-3Q8IUG1 177 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 FAM167A-AS1Q96KT0 104 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 NOL4LQ96MY1 436 aaPredicted RBP5.54□□□□□ -1.52
SMG1-215ENST00000568239 SMCO4Q9NRQ5 59 aa5.54□□□□□ -1.52
SMG1-215ENST00000568239 MXRA5Q9NR99 2828 aa5.53□□□□□ -1.52
SMG1-215ENST00000568239 A6NDX4 124 aa5.53□□□□□ -1.52
SMG1-215ENST00000568239 H3BTX0 84 aa5.53□□□□□ -1.52
SMG1-215ENST00000568239 NPPCP23582 126 aa5.53□□□□□ -1.52
SMG1-215ENST00000568239 PRSS57Q6UWY2 283 aa5.53□□□□□ -1.52
SMG1-215ENST00000568239 TRAV30A0A087WSZ9 112 aa5.53□□□□□ -1.52
SMG1-215ENST00000568239 F6UZH7 168 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms