RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 LINC00311Q8N616 119 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 Q8N7P7 452 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF439Q8NDP4 499 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 OR1L8Q8NGR8 309 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 OR2T10Q8NGZ9 312 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 OR5R1Q8NH85 324 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 RFESDQ8TAC1 157 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM170AQ8WVE7 144 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 ITLN1Q8WWA0 313 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TNFRSF14Q92956 283 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM186Q96B77 213 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 PACRGQ96M98 296 aaPredicted RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 GGTLC1Q9BX51 225 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 MRPL32Q9BYC8 188 aaKnown RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 GSN-AS1Q9NRJ2 163 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 RPUSD1Q9UJJ7 312 aaKnown RBP4.24□□□□□ -1.73
CAPN3-217ENST00000567817 FAM215AQ9Y5M1 114 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 RFNGQ9Y644 331 aa4.24□□□□□ -1.73
CAPN3-217ENST00000567817 MEGF8Q7Z7M0 2845 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 ARID1AO14497 2285 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 CUBNO60494 3623 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 IGHV3-64DA0A0J9YX35 117 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 DEFB108AA8MXU0 73 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 J3QR06 171 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 UPK2O00526 184 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 PHOX2AO14813 284 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 GCGP01275 180 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 USF1P22415 310 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-217ENST00000567817 MC5RP33032 325 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 COMPP49747 757 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-217ENST00000567817 LTC4SQ16873 150 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 LBHQ53QV2 105 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-217ENST00000567817 CT45A1Q5HYN5 189 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 ACTL10Q5JWF8 245 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 CST9LP1Q5W188 147 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 CIARTQ8N365 385 aaPredicted RBP4.23□□□□□ -1.73
CAPN3-217ENST00000567817 TPRX1Q8N7U7 411 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 TEX45Q8NA69 505 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 ZNRF1Q8ND25 227 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 STXBP6Q8NFX7 210 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 OR1L4Q8NGR5 311 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 OR4X1Q8NH49 305 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 CT45A3Q8NHU0 189 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 GATAD1Q8WUU5 269 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 FRZBQ92765 325 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 RNASE6Q93091 150 aaKnown RBP4.23□□□□□ -1.73
CAPN3-217ENST00000567817 TMEM18Q96B42 140 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 SFRP2Q96HF1 295 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 DOCK7Q96N67 2140 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 GAFA1Q96PS6 74 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 MGST2Q99735 147 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 COMMD5Q9GZQ3 224 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 SLC35D1Q9NTN3 355 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 TECRQ9NZ01 308 aaKnown RBP4.23□□□□□ -1.73
CAPN3-217ENST00000567817 FZR1Q9UM11 496 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 OR51B2Q9Y5P1 312 aa4.23□□□□□ -1.73
CAPN3-217ENST00000567817 PKD1L1Q8TDX9 2849 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 HRNRQ86YZ3 2850 aaPredicted RBP4.22□□□□□ -1.73
CAPN3-217ENST00000567817 MGAM2Q2M2H8 2515 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PPIAL4EA0A075B759 164 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 A0A087X0M5 115 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 A0A1B0GX30 115 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 A0A1W2PPQ1 181 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 A0A1W2PRE2 83 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PPIAL4DF5H284 164 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 CORTO00230 105 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 NDUFB3O43676 98 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 YIF1AO95070 293 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 MT-ND6P03923 174 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PRSS2P07478 247 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 OR10J4P0C629 311 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PPIAL4FP0DN26 164 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PAX1P15863 534 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 GCHFRP30047 84 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 AMTP48728 403 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 CNN1P51911 297 aaKnown RBP4.22□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF137PP52743 207 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 DSCR9P59020 149 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 BPIFB3P59826 476 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 YPEL3P61236 119 aaPredicted RBP4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PKIAP61925 76 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 SELENOTP62341 195 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 JOSD1Q15040 202 aaPredicted RBP4.22□□□□□ -1.73
CAPN3-217ENST00000567817 IQCJQ1A5X6 159 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 HLA-DRB5Q30154 266 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 RPL39P5Q59GN2 51 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 LRRC10Q5BKY1 277 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 PYY3Q5JQD4 70 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 ETFRF1Q6IPR1 90 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF383Q8NA42 475 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 OR10G8Q8NGN5 311 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 OR10D4PQ8NGN7 298 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 OR4C13Q8NGP0 309 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 OR1P1Q8NH06 330 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 SGMS2Q8NHU3 365 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 ZNF596Q8TC21 504 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 C22orf15Q8WYQ4 148 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 FLYWCH2Q96CP2 140 aaKnown RBP4.22□□□□□ -1.73
CAPN3-217ENST00000567817 SMIM12Q96EX1 92 aa4.22□□□□□ -1.73
CAPN3-217ENST00000567817 NOL4LQ96MY1 436 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms