RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 RD3LP0DJH9 198 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
COMMD4-220ENST00000567720 CRYBB3P26998 211 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 BCAP31P51572 246 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 OR10P1Q8NGE3 313 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 OR51G1Q8NGK1 321 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 RNF125Q96EQ8 232 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 WFDC10AQ9H1F0 79 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 OR5AC2Q9NZP5 309 aa12.91□□□□□ -0.34
COMMD4-220ENST00000567720 HUWE1Q7Z6Z7 4374 aaKnown RBP12.9□□□□□ -0.34
COMMD4-220ENST00000567720 FNDC10F2Z333 226 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 TSPAN4O14817 238 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 CST7O76096 145 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 CXCL3P19876 107 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 CD81P60033 236 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 SLC38A11Q08AI6 406 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 OR2F1Q13607 317 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 DEFB121Q5J5C9 76 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 FAM90A2PQ658T7 463 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 RBPMS2Q6ZRY4 209 aaKnown RBP12.9□□□□□ -0.34
COMMD4-220ENST00000567720 TMEM144Q7Z5S9 345 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 GTSCR1Q86UQ5 136 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 PPP1R1CQ8WVI7 109 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 SMAD5-AS1Q9Y6J3 95 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 U3KQE9 123 aa12.9□□□□□ -0.34
COMMD4-220ENST00000567720 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
COMMD4-220ENST00000567720 NPPCP23582 126 aa12.89□□□□□ -0.35
COMMD4-220ENST00000567720 CYCSP99999 105 aaKnown RBP12.89□□□□□ -0.35
COMMD4-220ENST00000567720 TMEM252Q8N6L7 170 aa12.89□□□□□ -0.35
COMMD4-220ENST00000567720 OR11H7Q8NGC8 314 aa12.89□□□□□ -0.35
COMMD4-220ENST00000567720 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
COMMD4-220ENST00000567720 NEURL2Q9BR09 285 aa12.89□□□□□ -0.35
COMMD4-220ENST00000567720 IGHV4-30-4P0DP06 118 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 GATA2P23769 480 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-220ENST00000567720 BMI1P35226 326 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 P2RY1P47900 373 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 SULT1A1P50225 295 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 LYZP61626 148 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 FCN2Q15485 313 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
COMMD4-220ENST00000567720 TCF24Q7RTU0 167 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 TMEM217Q8N7C4 229 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 PBDC1Q9BVG4 233 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
COMMD4-220ENST00000567720 DFFBO76075 338 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 MPC2O95563 127 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 FABP1P07148 127 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 STX12Q86Y82 276 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 GLMPQ8WWB7 406 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 B9D2Q9BPU9 175 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 GGACTQ9BVM4 153 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 MED28Q9H204 178 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 TMEM231Q9H6L2 316 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 C19orf73Q9NVV2 129 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 TENM3Q9P273 2699 aa12.87□□□□□ -0.35
COMMD4-220ENST00000567720 IGKV3-7A0A075B6H7 116 aa12.86□□□□□ -0.35
COMMD4-220ENST00000567720 E5RGE8 158 aa12.86□□□□□ -0.35
COMMD4-220ENST00000567720 FRMD6-AS1P0C7T7 363 aa12.86□□□□□ -0.35
COMMD4-220ENST00000567720 EIF2B2P49770 351 aaKnown RBP12.86□□□□□ -0.35
COMMD4-220ENST00000567720 CYP2G1PQ6ZSU1 146 aa12.86□□□□□ -0.35
COMMD4-220ENST00000567720 STPG3Q8N7X2 389 aa12.86□□□□□ -0.35
COMMD4-220ENST00000567720 NPVFQ9HCQ7 196 aa12.86□□□□□ -0.35
COMMD4-220ENST00000567720 A0A1W2PS18 150 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 EWSR1Q01844 656 aaKnown RBP eCLIP12.85□□□□□ -0.35
COMMD4-220ENST00000567720 VWC2Q2TAL6 325 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 TEPPQ6URK8 271 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 C16orf54Q6UWD8 224 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 BPIFCQ8NFQ6 507 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 NARS2Q96I59 477 aaKnown RBP12.85□□□□□ -0.35
COMMD4-220ENST00000567720 RNF126Q9BV68 326 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 MBD2Q9UBB5 411 aa12.85□□□□□ -0.35
COMMD4-220ENST00000567720 UBE2L5PA0A1B0GUS4 154 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 OR4C46A6NHA9 309 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 A8MZ25 164 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 BUB3O43684 328 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 RLN2P04090 185 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 PET100P0DJ07 73 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 TFPI2P48307 235 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 DEFB125Q8N687 156 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 MGST2Q99735 147 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 TMEM147Q9BVK8 224 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 UQCC1Q9NVA1 299 aa12.84□□□□□ -0.35
COMMD4-220ENST00000567720 OR11H12B2RN74 326 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 CD5P06127 495 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 LINC00869P0C866 280 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 HBG1P69891 147 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 HBG2P69892 147 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 NHLH2Q02577 135 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 GRAMD2BQ96HH9 432 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 MS4A6AQ9H2W1 248 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 UBQLN2Q9UHD9 624 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 WDR83OSQ9Y284 106 aa12.83□□□□□ -0.36
COMMD4-220ENST00000567720 AGPAT2O15120 278 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 CFDP00746 253 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-220ENST00000567720 S100A11P31949 105 aa12.82□□□□□ -0.36
COMMD4-220ENST00000567720 NUP62P37198 522 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms