RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 S100A11P31949 105 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 TEPPQ6URK8 271 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 BTNL8Q6UX41 500 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 THAP6Q8TBB0 222 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 OR5AC2Q9NZP5 309 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 PFDN2Q9UHV9 154 aa9.23□□□□□ -0.93
SF3B3-208ENST00000567250 IGHV3OR16-8A0A075B7F1 116 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 TRAV25A0A0B4J276 109 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 CCNKO75909 580 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 CST7O76096 145 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 PSG1P11464 419 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 NPPCP23582 126 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 RAP2BP61225 183 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 DEFA6Q01524 100 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 ATP6V1FQ16864 119 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 CD300EQ496F6 205 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-208ENST00000567250 LAMTOR1Q6IAA8 161 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 RBPMS2Q6ZRY4 209 aaKnown RBP9.22□□□□□ -0.93
SF3B3-208ENST00000567250 GTSCR1Q86UQ5 136 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 HAPLN4Q86UW8 402 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 TMEM217Q8N7C4 229 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 BPIFCQ8NFQ6 507 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 RNF125Q96EQ8 232 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 GRAMD2BQ96HH9 432 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 TMEM147Q9BVK8 224 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 UQCC1Q9NVA1 299 aa9.22□□□□□ -0.93
SF3B3-208ENST00000567250 AURKAIP1Q9NWT8 199 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-208ENST00000567250 IGKV1D-37A0A075B6S9 117 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 IGKV1OR2-108A0A075B7D4 117 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 IGSF23A1L1A6 192 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 ZNF207O43670 478 aaKnown RBP9.21□□□□□ -0.94
SF3B3-208ENST00000567250 HNRNPCP07910 306 aaKnown RBP eCLIP9.21□□□□□ -0.94
SF3B3-208ENST00000567250 GP9P14770 177 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 EDN2P20800 178 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 EIF2B2P49770 351 aaKnown RBP9.21□□□□□ -0.94
SF3B3-208ENST00000567250 SELENOTP62341 195 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 EWSR1Q01844 656 aaKnown RBP eCLIP9.21□□□□□ -0.94
SF3B3-208ENST00000567250 ZNF90Q03938 601 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 RAB31Q13636 194 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 DEFB114Q30KQ6 69 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 ADAMTSL5Q6ZMM2 481 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 S100A7AQ86SG5 101 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 ZNF546Q86UE3 836 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 ZNF414Q96IQ9 312 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 PBDC1Q9BVG4 233 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 RHPN1-AS1Q9BWJ2 59 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 MBD2Q9UBB5 411 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 MLXQ9UH92 298 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 SMPXQ9UHP9 88 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 RABAC1Q9UI14 185 aa9.21□□□□□ -0.94
SF3B3-208ENST00000567250 UBE2L5PA0A1B0GUS4 154 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 H0YIZ8 118 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 CHEK1O14757 476 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 CRYBB3P26998 211 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 KRTAP10-11P60412 298 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 LYZP61626 148 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 VWC2Q2TAL6 325 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 TMEM61Q8N0U2 210 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 VSIRQ9H7M9 311 aa9.2□□□□□ -0.94
SF3B3-208ENST00000567250 SORL1Q92673 2214 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 WI2-2373I1.2A0A1W2PRP0 233 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 MPDU1O75352 247 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 LYL1P12980 280 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 RPL12P30050 165 aaKnown RBP9.19□□□□□ -0.94
SF3B3-208ENST00000567250 OR2F1Q13607 317 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 USF2Q15853 346 aaPredicted RBP9.19□□□□□ -0.94
SF3B3-208ENST00000567250 GUCA2BQ16661 112 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 CYP2G1PQ6ZSU1 146 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 OR5C1Q8NGR4 320 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 WDR89Q96FK6 387 aaPredicted RBP9.19□□□□□ -0.94
SF3B3-208ENST00000567250 PRR25Q96S07 402 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 SPAG8Q99932 426 aaPredicted RBP9.19□□□□□ -0.94
SF3B3-208ENST00000567250 SLC45A2Q9UMX9 530 aa9.19□□□□□ -0.94
SF3B3-208ENST00000567250 IGHV3-49A0A0A0MS15 119 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 OR4C46A6NHA9 309 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 TSPAN4O14817 238 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 AGPAT2O15120 278 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 DFFBO76075 338 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 LINC00869P0C866 280 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 PXDC1Q5TGL8 231 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 OR2T35Q8NGX2 323 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 MRAPQ8TCY5 172 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 ST8SIA2Q92186 375 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 PPP1R14BQ96C90 147 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 KCNIP2Q9NS61 270 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 RNF24Q9Y225 148 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 WDR83OSQ9Y284 106 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 LSM4Q9Y4Z0 139 aaKnown RBP9.18□□□□□ -0.94
SF3B3-208ENST00000567250 HSPB11Q9Y547 144 aa9.18□□□□□ -0.94
SF3B3-208ENST00000567250 IGHV3OR16-13A0A075B7E8 117 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 IGHV3-74A0A0B4J1X5 117 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 IZUMO1RA6ND01 250 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 HELTA6NFD8 242 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 FGF7P21781 194 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 CAMLGP49069 296 aa9.17□□□□□ -0.94
SF3B3-208ENST00000567250 AP2S1P53680 142 aaPredicted RBP9.17□□□□□ -0.94
SF3B3-208ENST00000567250 PAFAH1B2P68402 229 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms