RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 ZNF207O43670 478 aaKnown RBP9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 SIX6O95475 246 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 PRB2P02812 416 aaPredicted RBP9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 HNRNPCP07910 306 aaKnown RBP eCLIP9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 P2RY1P47900 373 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 SULT1A1P50225 295 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 AP2S1P53680 142 aaPredicted RBP9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 H2BFSP57053 126 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 AKR1C1Q04828 323 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 GUCA2BQ16661 112 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 TEPPQ6URK8 271 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 BTNL8Q6UX41 500 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 PRR25Q96S07 402 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 SPAG8Q99932 426 aaPredicted RBP9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 C11orf1Q9H5F2 150 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 RABAC1Q9UI14 185 aa9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 LSM4Q9Y4Z0 139 aaKnown RBP9.5□□□□□ -0.89
SHCBP1-204ENST00000565887 IGKV1D-37A0A075B6S9 117 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 IGHV3OR16-8A0A075B7F1 116 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 IL4P05112 153 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 ACOT7LQ6ZUV0 252 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 TMEM61Q8N0U2 210 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 TMEM252Q8N6L7 170 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 BPIFCQ8NFQ6 507 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 PPP1R1CQ8WVI7 109 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 ZNF414Q96IQ9 312 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 SLC45A2Q9UMX9 530 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 RNF24Q9Y225 148 aa9.49□□□□□ -0.89
SHCBP1-204ENST00000565887 SMCO3A2RU48 225 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 HELTA6NFD8 242 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 FAM24AA6NFZ4 105 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 OR4C46A6NHA9 309 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 A8MZ25 164 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 BAXQ07812 192 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 FGL1Q08830 312 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 C1orf194Q5T5A4 169 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 PXDC1Q5TGL8 231 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 HAPLN4Q86UW8 402 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 RNF125Q96EQ8 232 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 FAM110AQ9BQ89 295 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 U3KQE9 123 aa9.48□□□□□ -0.89
SHCBP1-204ENST00000565887 IGKV1OR2-108A0A075B7D4 117 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 TRAV2A0A0B4J234 112 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 IZUMO1RA6ND01 250 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 MPC2O95563 127 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 RRAS2P62070 204 aaPredicted RBP9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 ZNF90Q03938 601 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 SLC38A11Q08AI6 406 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 LRRC37A5PQ49AS3 106 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 FAM90A2PQ658T7 463 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 Q8N1Y9 231 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 LILRB2Q8N423 598 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 THAP6Q8TBB0 222 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 WDR89Q96FK6 387 aaPredicted RBP9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 RNF2Q99496 336 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 NEURL2Q9BR09 285 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
SHCBP1-204ENST00000565887 MPDU1O75352 247 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 CST7O76096 145 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 EDN2P20800 178 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 RPL11P62913 178 aaKnown RBP9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 CYP2G1PQ6ZSU1 146 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 TCF24Q7RTU0 167 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 ZNF546Q86UE3 836 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 ST8SIA2Q92186 375 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 TMEM147Q9BVK8 224 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 TUBA4BQ9H853 241 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 UQCC1Q9NVA1 299 aa9.46□□□□□ -0.9
SHCBP1-204ENST00000565887 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 DNASE2O00115 360 aaPredicted RBP9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 BUB3O43684 328 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 NHLRC4P0CG21 123 aaPredicted RBP9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 CD81P60033 236 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 PLP1P60201 277 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 RAP2BP61225 183 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 LYZP61626 148 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 ARL16Q0P5N6 197 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 OR2F1Q13607 317 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 USF2Q15853 346 aaPredicted RBP9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 VWC2Q2TAL6 325 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 C16orf54Q6UWD8 224 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 TMEM217Q8N7C4 229 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 CHAC2Q8WUX2 184 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 PPP1R14BQ96C90 147 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 B9D2Q9BPU9 175 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 RNF126Q9BV68 326 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 PBDC1Q9BVG4 233 aa9.45□□□□□ -0.9
SHCBP1-204ENST00000565887 DNAH3Q8TD57 4116 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 IGSF23A1L1A6 192 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 OR11H12B2RN74 326 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 H0YIZ8 118 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 HYPMO75409 117 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 CCNKO75909 580 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 DFFBO76075 338 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 APOHP02749 345 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 GIPP09681 153 aaPredicted RBP9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 LYL1P12980 280 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 CXCL3P19876 107 aa9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 EWSR1Q01844 656 aaKnown RBP eCLIP9.44□□□□□ -0.9
SHCBP1-204ENST00000565887 FCN2Q15485 313 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms