RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DEDD2Q8WXF8 326 aa8.87□□□□□ -0.99
GTF3C1-204ENST00000564664 C1QTNF4Q9BXJ3 329 aa8.87□□□□□ -0.99
GTF3C1-204ENST00000564664 NRN1Q9NPD7 142 aa8.87□□□□□ -0.99
GTF3C1-204ENST00000564664 FBXL17Q9UF56 701 aa8.87□□□□□ -0.99
GTF3C1-204ENST00000564664 FABP1P07148 127 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 AKR1C4P17516 323 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 TNFSF8P32971 234 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 AP3S2P59780 193 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 ACTL10Q5JWF8 245 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 OR8G2PQ6IF36 304 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 Q8NAQ8 132 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 OR51G1Q8NGK1 321 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 DTD1Q8TEA8 209 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 SLIRPQ9GZT3 109 aaKnown RBP8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 MCUBQ9NWR8 336 aa8.86□□□□□ -0.99
GTF3C1-204ENST00000564664 AGRNO00468 2067 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 KNCNA6PVL3 124 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 NXPH3O95157 252 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 PSG1P11464 419 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 SLC25A6P12236 298 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 SUPT4H1P63272 117 aaKnown RBP8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 USF2Q15853 346 aaPredicted RBP8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 PSMG4Q5JS54 123 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 SIGLEC15Q6ZMC9 328 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 LYZL2Q7Z4W2 148 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 CSNK1G2-AS1Q8NCQ2 148 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 ACY3Q96HD9 319 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 RBKSQ9H477 322 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 TBC1D24Q9ULP9 559 aa8.85□□□□□ -0.99
GTF3C1-204ENST00000564664 KMT2AQ03164 3969 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 IGHV4-28A0A0C4DH34 117 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 FAM90A26D6RGX4 464 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 DEFB4AO15263 64 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 MED6O75586 246 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 CFDP00746 253 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 RBMY1A1P0DJD3 496 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 RBMY1CP0DJD4 496 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 NKX2-1P43699 371 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 RAB11AP62491 216 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 RBMY1FQ15415 496 aaKnown RBP8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 TMEM128Q5BJH2 165 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 LRTM2Q8N967 370 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 OR1S1Q8NH92 325 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 MCFD2Q8NI22 146 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 SLC25A21Q9BQT8 299 aaPredicted RBP8.84□□□□□ -0.99
GTF3C1-204ENST00000564664 TRAV10A0A0B4J240 114 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 ZFP92A6NM28 416 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 SNRPGP15A8MWD9 76 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 H3BMM0 161 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 PITX3O75364 302 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 ID1P41134 155 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 RPP30P78346 268 aaKnown RBP8.83□□□□□ -1
GTF3C1-204ENST00000564664 GAMTQ14353 236 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 SAMD13Q5VXD3 122 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 TOMM5Q8N4H5 51 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 RNF125Q96EQ8 232 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 SLC35E1Q96K37 410 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 CLUHP3Q96NS8 147 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 CIB3Q96Q77 187 aaPredicted RBP8.83□□□□□ -1
GTF3C1-204ENST00000564664 X6R8D5 127 aa8.83□□□□□ -1
GTF3C1-204ENST00000564664 SMIM9A6NGZ8 99 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 IGLL5B9A064 214 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 C4BPBP20851 252 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 S100A7P31151 101 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 RPP25LQ8N5L8 163 aaKnown RBP8.82□□□□□ -1
GTF3C1-204ENST00000564664 NEU1Q99519 415 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 APLNQ9ULZ1 77 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 TMED3Q9Y3Q3 217 aa8.82□□□□□ -1
GTF3C1-204ENST00000564664 HLA-DRB4P13762 266 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 HLA-DMBP28068 263 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 PYDC2Q56P42 97 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 GGNBP1Q5YKI7 109 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 TRGV9Q99603 122 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 WDR12Q9GZL7 423 aaKnown RBP8.81□□□□□ -1
GTF3C1-204ENST00000564664 PRR13Q9NZ81 148 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 HLA-DRB4X5D2U9 266 aa8.81□□□□□ -1
GTF3C1-204ENST00000564664 IGKV1D-37A0A075B6S9 117 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 ELOA3CA0A087WX78 387 aaPredicted RBP8.8□□□□□ -1
GTF3C1-204ENST00000564664 TMEM189A5PLL7 270 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 S100A5P33763 92 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 PSMB3P49720 205 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 UBE2MP61081 183 aaKnown RBP8.8□□□□□ -1
GTF3C1-204ENST00000564664 TMED4Q7Z7H5 227 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 THAP8Q8NA92 274 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 TRIM63Q969Q1 353 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 RNF126Q9BV68 326 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 PBDC1Q9BVG4 233 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 CLEC5AQ9NY25 188 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
GTF3C1-204ENST00000564664 ISLRO14498 428 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 DEDDO75618 318 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 SFT2D2O95562 160 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 MEOX2P50222 304 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 ZNF90Q03938 601 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 ZNF846Q147U1 533 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 Q6ZNX1 250 aa8.79□□□□□ -1
GTF3C1-204ENST00000564664 FOXI2Q6ZQN5 318 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms