RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 CSTL1Q9H114 145 aa9.31□□□□□ -0.92
HERC2-206ENST00000564519 PAIP2BQ9ULR5 123 aaKnown RBP9.31□□□□□ -0.92
HERC2-206ENST00000564519 FAM90A26D6RGX4 464 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 WRBO00258 174 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 SYNGR2O43760 224 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 LY6G6CO95867 125 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 ZNF688P0C7X2 276 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
HERC2-206ENST00000564519 UBE2MP61081 183 aaKnown RBP9.3□□□□□ -0.92
HERC2-206ENST00000564519 DHRS2Q13268 280 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 GRAMD2BQ96HH9 432 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 NARS2Q96I59 477 aaKnown RBP9.3□□□□□ -0.92
HERC2-206ENST00000564519 SLC35E1Q96K37 410 aa9.3□□□□□ -0.92
HERC2-206ENST00000564519 IGKV1OR2-108A0A075B7D4 117 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 CXorf65A6NEN9 183 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 ZFP92A6NM28 416 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 PRSS46E5RG02 174 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 H3BP45 60 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 PLA2G10O15496 165 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 BUB3O43684 328 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 OR4E1P0C645 316 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 GSG1LQ6UXU4 331 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 RNF125Q96EQ8 232 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 PBDC1Q9BVG4 233 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 NDUFA13Q9P0J0 144 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 ALMS1Q8TCU4 4167 aa9.29□□□□□ -0.92
HERC2-206ENST00000564519 HELTA6NFD8 242 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 MED6O75586 246 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 CA1P00915 261 aaPredicted RBP9.28□□□□□ -0.92
HERC2-206ENST00000564519 GIG44P09565 113 aaPredicted RBP9.28□□□□□ -0.92
HERC2-206ENST00000564519 POLR2GP62487 172 aaKnown RBP eCLIP9.28□□□□□ -0.92
HERC2-206ENST00000564519 RAB11AP62491 216 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 ID3Q02535 119 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 OR2F1Q13607 317 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 PMS2P11Q13670 270 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 C4orf46Q504U0 113 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 SPANXN5Q5MJ07 72 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 COQ8AQ8NI60 647 aa9.28□□□□□ -0.92
HERC2-206ENST00000564519 C7orf50Q9BRJ6 194 aaKnown RBP9.28□□□□□ -0.92
HERC2-206ENST00000564519 CENPXA8MT69 81 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 EIF2B2P49770 351 aaKnown RBP9.27□□□□□ -0.93
HERC2-206ENST00000564519 LYZP61626 148 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 PSMG4Q5JS54 123 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 SIGLEC15Q6ZMC9 328 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 TRPT1Q86TN4 253 aaKnown RBP9.27□□□□□ -0.93
HERC2-206ENST00000564519 STHQ8IWL8 128 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 THAP8Q8NA92 274 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 OR4D5Q8NGN0 318 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 LINC00476Q8WZB0 136 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 CIB3Q96Q77 187 aaPredicted RBP9.27□□□□□ -0.93
HERC2-206ENST00000564519 TRGV9Q99603 122 aa9.27□□□□□ -0.93
HERC2-206ENST00000564519 NUPR2A6NF83 97 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 C4BPBP20851 252 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 AP2S1P53680 142 aaPredicted RBP9.26□□□□□ -0.93
HERC2-206ENST00000564519 ACTL10Q5JWF8 245 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 TMEM182Q6ZP80 229 aaPredicted RBP9.26□□□□□ -0.93
HERC2-206ENST00000564519 OR11H2Q8NH07 326 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 GATAD1Q8WUU5 269 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 RARRES2Q99969 163 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 C20orf85Q9H1P6 137 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 NRN1Q9NPD7 142 aa9.26□□□□□ -0.93
HERC2-206ENST00000564519 PMS2P5A8MQ11 134 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 LYRM1O43325 122 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 SSSCA1O60232 199 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 CCNKO75909 580 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 GATA2P23769 480 aaPredicted RBP9.25□□□□□ -0.93
HERC2-206ENST00000564519 NKX2-1P43699 371 aaPredicted RBP9.25□□□□□ -0.93
HERC2-206ENST00000564519 PAX9P55771 341 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 RPP30P78346 268 aaKnown RBP9.25□□□□□ -0.93
HERC2-206ENST00000564519 OR8G2PQ6IF36 304 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 ACOT7LQ6ZUV0 252 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 MITD1Q8WV92 249 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 RAB40CQ96S21 281 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 WDR12Q9GZL7 423 aaKnown RBP9.25□□□□□ -0.93
HERC2-206ENST00000564519 PSENENQ9NZ42 101 aa9.25□□□□□ -0.93
HERC2-206ENST00000564519 STRAPQ9Y3F4 350 aaKnown RBP9.25□□□□□ -0.93
HERC2-206ENST00000564519 TRAV6A0A075B6T7 132 aa9.24□□□□□ -0.93
HERC2-206ENST00000564519 SNRPGP15A8MWD9 76 aa9.24□□□□□ -0.93
HERC2-206ENST00000564519 DEFB4AO15263 64 aa9.24□□□□□ -0.93
HERC2-206ENST00000564519 SCGB1D2O95969 90 aa9.24□□□□□ -0.93
HERC2-206ENST00000564519 IFNA21P01568 189 aa9.24□□□□□ -0.93
HERC2-206ENST00000564519 DEFB1P60022 68 aa9.24□□□□□ -0.93
HERC2-206ENST00000564519 IAH1Q2TAA2 248 aaPredicted RBP9.24□□□□□ -0.93
HERC2-206ENST00000564519 KLK5Q9Y337 293 aaPredicted RBP9.24□□□□□ -0.93
HERC2-206ENST00000564519 CCSO14618 274 aa9.23□□□□□ -0.93
HERC2-206ENST00000564519 TCRBP04435 133 aa9.23□□□□□ -0.93
HERC2-206ENST00000564519 FABP1P07148 127 aa9.23□□□□□ -0.93
HERC2-206ENST00000564519 ATF4P18848 351 aaPredicted RBP9.23□□□□□ -0.93
HERC2-206ENST00000564519 AKR1C1Q04828 323 aa9.23□□□□□ -0.93
HERC2-206ENST00000564519 ZBTB8BQ8NAP8 495 aaPredicted RBP9.23□□□□□ -0.93
HERC2-206ENST00000564519 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
HERC2-206ENST00000564519 CLEC5AQ9NY25 188 aa9.23□□□□□ -0.93
HERC2-206ENST00000564519 SOCS3O14543 225 aa9.22□□□□□ -0.93
HERC2-206ENST00000564519 SPP1P10451 314 aa9.22□□□□□ -0.93
HERC2-206ENST00000564519 NUP62P37198 522 aaPredicted RBP9.22□□□□□ -0.93
HERC2-206ENST00000564519 NANOS2P60321 138 aaKnown RBP9.22□□□□□ -0.93
HERC2-206ENST00000564519 RRAS2P62070 204 aaPredicted RBP9.22□□□□□ -0.93
HERC2-206ENST00000564519 SNRPD3P62318 126 aaKnown RBP9.22□□□□□ -0.93
HERC2-206ENST00000564519 CNPY1Q3B7I2 92 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms