RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 USF2Q15853 346 aaPredicted RBP10.92□□□□□ -0.66
SPG7-210ENST00000564409 TMEM128Q5BJH2 165 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 ACTL10Q5JWF8 245 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 OR8G2PQ6IF36 304 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 LYZL2Q7Z4W2 148 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 CENPSQ8N2Z9 138 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 OR51G1Q8NGK1 321 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 C2CD4CQ8TF44 421 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 RAB40CQ96S21 281 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 FBXL17Q9UF56 701 aa10.92□□□□□ -0.66
SPG7-210ENST00000564409 FAM90A26D6RGX4 464 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 PSG1P11464 419 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 PSMG4Q5JS54 123 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 OR1S1Q8NH92 325 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 RNF125Q96EQ8 232 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 SLC35E1Q96K37 410 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 SLC25A21Q9BQT8 299 aaPredicted RBP10.91□□□□□ -0.66
SPG7-210ENST00000564409 RBKSQ9H477 322 aa10.91□□□□□ -0.66
SPG7-210ENST00000564409 PLECQ15149 4684 aaKnown RBP10.9□□□□□ -0.66
SPG7-210ENST00000564409 KNCNA6PVL3 124 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 NXPH3O95157 252 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 RAB11AP62491 216 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 C1orf194Q5T5A4 169 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 TOMM5Q8N4H5 51 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 LRTM2Q8N967 370 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 TBC1D24Q9ULP9 559 aa10.9□□□□□ -0.66
SPG7-210ENST00000564409 IGHV4-28A0A0C4DH34 117 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 ZFP92A6NM28 416 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 PITX3O75364 302 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 MED6O75586 246 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 CFDP00746 253 aaPredicted RBP10.89□□□□□ -0.67
SPG7-210ENST00000564409 NKX2-1P43699 371 aaPredicted RBP10.89□□□□□ -0.67
SPG7-210ENST00000564409 GAMTQ14353 236 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 SAMD13Q5VXD3 122 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 CSNK1G2-AS1Q8NCQ2 148 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 CIB3Q96Q77 187 aaPredicted RBP10.89□□□□□ -0.67
SPG7-210ENST00000564409 PRR13Q9NZ81 148 aa10.89□□□□□ -0.67
SPG7-210ENST00000564409 SNRPGP15A8MWD9 76 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 DEFB4AO15263 64 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
SPG7-210ENST00000564409 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 C4BPBP20851 252 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 S100A5P33763 92 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 RPP30P78346 268 aaKnown RBP10.88□□□□□ -0.67
SPG7-210ENST00000564409 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
SPG7-210ENST00000564409 PYDC2Q56P42 97 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 TRIM63Q969Q1 353 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 TMED3Q9Y3Q3 217 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 X6R8D5 127 aa10.88□□□□□ -0.67
SPG7-210ENST00000564409 H3BMM0 161 aa10.87□□□□□ -0.67
SPG7-210ENST00000564409 ID1P41134 155 aa10.87□□□□□ -0.67
SPG7-210ENST00000564409 SPATA31B1PQ5VZV4 182 aa10.87□□□□□ -0.67
SPG7-210ENST00000564409 TMED4Q7Z7H5 227 aa10.87□□□□□ -0.67
SPG7-210ENST00000564409 CLUHP3Q96NS8 147 aa10.87□□□□□ -0.67
SPG7-210ENST00000564409 TRGV9Q99603 122 aa10.87□□□□□ -0.67
SPG7-210ENST00000564409 TRAV10A0A0B4J240 114 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 HLA-DRB4P13762 266 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 VAMP1P23763 118 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 S100A7P31151 101 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 PSMB3P49720 205 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 UBE2MP61081 183 aaKnown RBP10.86□□□□□ -0.67
SPG7-210ENST00000564409 GGNBP1Q5YKI7 109 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 PBDC1Q9BVG4 233 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 V9GYH0 126 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 HLA-DRB4X5D2U9 266 aa10.86□□□□□ -0.67
SPG7-210ENST00000564409 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 IGLL5B9A064 214 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 HLA-DMBP28068 263 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 ZNF90Q03938 601 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 RPP25LQ8N5L8 163 aaKnown RBP10.85□□□□□ -0.67
SPG7-210ENST00000564409 THAP8Q8NA92 274 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 NEU1Q99519 415 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 SLC45A2Q9UMX9 530 aa10.85□□□□□ -0.67
SPG7-210ENST00000564409 ELOA3CA0A087WX78 387 aaPredicted RBP10.84□□□□□ -0.67
SPG7-210ENST00000564409 SMIM9A6NGZ8 99 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 ISLRO14498 428 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 SYNGR2O43760 224 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 SFT2D2O95562 160 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 MEOX2P50222 304 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 FOXI2Q6ZQN5 318 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 CLEC5AQ9NY25 188 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 XCL2Q9UBD3 114 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 APLNQ9ULZ1 77 aa10.84□□□□□ -0.67
SPG7-210ENST00000564409 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 ZNF701M0R085 212 aaPredicted RBP10.83□□□□□ -0.68
SPG7-210ENST00000564409 LYZP61626 148 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 ZNF79Q15937 498 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 SPANXN2Q5MJ10 180 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 ZNF705AQ6ZN79 300 aaPredicted RBP10.83□□□□□ -0.68
SPG7-210ENST00000564409 CCDC190Q86UF4 302 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 OR8I2Q8N0Y5 310 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 PPP1R14BQ96C90 147 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 RNF126Q9BV68 326 aa10.83□□□□□ -0.68
SPG7-210ENST00000564409 SAV1Q9H4B6 383 aaPredicted RBP10.83□□□□□ -0.68
SPG7-210ENST00000564409 CCDC160A6NGH7 325 aa10.82□□□□□ -0.68
SPG7-210ENST00000564409 DEDDO75618 318 aa10.82□□□□□ -0.68
SPG7-210ENST00000564409 IAPPP10997 89 aa10.82□□□□□ -0.68
SPG7-210ENST00000564409 PPP1R1AQ13522 171 aa10.82□□□□□ -0.68
SPG7-210ENST00000564409 Q6ZTC4 211 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms