RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 Q56UQ5 140 aa11.72□□□□□ -0.53
RNF40-205ENST00000563909 SPANXN5Q5MJ07 72 aa11.72□□□□□ -0.53
RNF40-205ENST00000563909 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
RNF40-205ENST00000563909 PAIP2BQ9ULR5 123 aaKnown RBP11.72□□□□□ -0.53
RNF40-205ENST00000563909 RCL1Q9Y2P8 373 aaKnown RBP11.72□□□□□ -0.53
RNF40-205ENST00000563909 STRAPQ9Y3F4 350 aaKnown RBP11.72□□□□□ -0.53
RNF40-205ENST00000563909 LSM5Q9Y4Y9 91 aaKnown RBP11.72□□□□□ -0.53
RNF40-205ENST00000563909 C15orf62A8K5M9 175 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 PPP5D1E7EU14 171 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 L7N2F9 121 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 TSC22D2O75157 780 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
RNF40-205ENST00000563909 SCAF4O95104 1147 aaKnown RBP11.71□□□□□ -0.53
RNF40-205ENST00000563909 SLC25A4P12235 298 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 ARL3P36405 182 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 NPBWR1P48145 328 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 S100A10P60903 97 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 VAMP2P63027 116 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 RAB32Q13637 225 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 CACNG8Q8WXS5 425 aa11.71□□□□□ -0.53
RNF40-205ENST00000563909 BSCL2Q96G97 398 aaPredicted RBP11.71□□□□□ -0.53
RNF40-205ENST00000563909 DMBT1Q9UGM3 2413 aaPredicted RBP11.71□□□□□ -0.54
RNF40-205ENST00000563909 LGALS9O00182 355 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 OR2C1O95371 312 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 RLN2P04090 185 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 CBLN1P23435 193 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 GPR183P32249 361 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 GPX4P36969 197 aaPredicted RBP11.7□□□□□ -0.54
RNF40-205ENST00000563909 PAX9P55771 341 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 H2BFSP57053 126 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 SPSB3Q6PJ21 355 aa11.7□□□□□ -0.54
RNF40-205ENST00000563909 FNDC4Q9H6D8 234 aaPredicted RBP11.7□□□□□ -0.54
RNF40-205ENST00000563909 UBR4Q5T4S7 5183 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 H3BP45 60 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 M0R2N4 97 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 TGOLN2O43493 480 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 GNG7O60262 68 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 SCGB2A1O75556 95 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 TMEM50AO95807 157 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 IGHV3-48P01763 117 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 RRAS2P62070 204 aaPredicted RBP11.69□□□□□ -0.54
RNF40-205ENST00000563909 FCN2Q15485 313 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 MLANAQ16655 118 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 OR4X1Q8NH49 305 aa11.69□□□□□ -0.54
RNF40-205ENST00000563909 KIR2DL5BA0A0G2JN68 375 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 KIR2DL5BA0A0G2JPC4 375 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 F8W735 103 aaPredicted RBP11.68□□□□□ -0.54
RNF40-205ENST00000563909 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
RNF40-205ENST00000563909 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 TMEM14EPQ6UXP3 125 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 GPHB5Q86YW7 130 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 KIR2DL5AQ8N109 375 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 KIR2DL5BQ8NHK3 375 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 MLXQ9UH92 298 aa11.68□□□□□ -0.54
RNF40-205ENST00000563909 TRAV30A0A087WSZ9 112 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 CLN5O75503 358 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 CTSGP08311 255 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 PET100P0DJ07 73 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 CXCL3P19876 107 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 BCAP31P51572 246 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 LRRC37A5PQ49AS3 106 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 FAM106AQ4KMX7 169 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 PRSS54Q6PEW0 395 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 TMEM116Q8NCL8 245 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 OR11H7Q8NGC8 314 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 PPP1R1CQ8WVI7 109 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 ASB13Q8WXK3 278 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
RNF40-205ENST00000563909 APOBP04114 4563 aaKnown RBP11.67□□□□□ -0.54
RNF40-205ENST00000563909 ZNF320A2RRD8 509 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 E5RGE8 158 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 RPL35AP18077 110 aaKnown RBP11.66□□□□□ -0.54
RNF40-205ENST00000563909 CAV2P51636 162 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 RELQ04864 619 aaPredicted RBP11.66□□□□□ -0.54
RNF40-205ENST00000563909 Q8N1X5 172 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 OR10P1Q8NGE3 313 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 SLC35E1Q96K37 410 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
RNF40-205ENST00000563909 ZNF436Q9C0F3 470 aaPredicted RBP11.66□□□□□ -0.54
RNF40-205ENST00000563909 TMEM213A2RRL7 107 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 PRSS46E5RG02 174 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 MPC2O95563 127 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 METTL15P1P0C7V9 234 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 RND2P52198 227 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 OR8G2PQ6IF36 304 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 ACY3Q96HD9 319 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 RARRES2Q99969 163 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 LYRM2Q9NU23 88 aaPredicted RBP11.65□□□□□ -0.54
RNF40-205ENST00000563909 MRPL36Q9P0J6 103 aaKnown RBP11.65□□□□□ -0.54
RNF40-205ENST00000563909 UBQLN2Q9UHD9 624 aa11.65□□□□□ -0.54
RNF40-205ENST00000563909 FAM24AA6NFZ4 105 aa11.64□□□□□ -0.55
RNF40-205ENST00000563909 NDUFA4O00483 81 aa11.64□□□□□ -0.55
RNF40-205ENST00000563909 GIPP09681 153 aaPredicted RBP11.64□□□□□ -0.55
RNF40-205ENST00000563909 ADMP35318 185 aa11.64□□□□□ -0.55
RNF40-205ENST00000563909 P2RY1P47900 373 aa11.64□□□□□ -0.55
RNF40-205ENST00000563909 GAMTQ14353 236 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 282 ms