RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 RABAC1Q9UI14 185 aa9.97□□□□□ -0.81
CLK3-213ENST00000563842 TENM3Q9P273 2699 aa9.96□□□□□ -0.81
CLK3-213ENST00000563842 IGHV3-66A0A0C4DH42 116 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 C3orf84H3BNL1 204 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 UBE2CO00762 179 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 SCGB1D2O95969 90 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 CFDP00746 253 aaPredicted RBP9.96□□□□□ -0.82
CLK3-213ENST00000563842 LILRB2Q8N423 598 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 ZBTB8BQ8NAP8 495 aaPredicted RBP9.96□□□□□ -0.82
CLK3-213ENST00000563842 ENKURQ8TC29 256 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 SMIM8Q96KF7 97 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 TRGV9Q99603 122 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 MS4A6AQ9H2W1 248 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 GSKIPQ9P0R6 139 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 TBC1D24Q9ULP9 559 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 U3KQE9 123 aa9.96□□□□□ -0.82
CLK3-213ENST00000563842 KIR2DL5BA0A0G2JN68 375 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 KIR2DL5BA0A0G2JPC4 375 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 SNRPGP15A8MWD9 76 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 H3BP45 60 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 SSSCA1O60232 199 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 TAS2R30P59541 319 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 USF2Q15853 346 aaPredicted RBP9.95□□□□□ -0.82
CLK3-213ENST00000563842 OR8G2PQ6IF36 304 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 WFDC3Q8IUB2 231 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 KIR2DL5AQ8N109 375 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 C12orf45Q8N5I9 185 aaPredicted RBP9.95□□□□□ -0.82
CLK3-213ENST00000563842 THAP8Q8NA92 274 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 KIR2DL5BQ8NHK3 375 aa9.95□□□□□ -0.82
CLK3-213ENST00000563842 C5orf51A6NDU8 294 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 TSC22D2O75157 780 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 IL5P05113 134 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 S100A7P31151 101 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 AKR1C1Q04828 323 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 C16orf54Q6UWD8 224 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 STPG3Q8N7X2 389 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 STXBP6Q8NFX7 210 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 MUC7Q8TAX7 377 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 SEC22CQ9BRL7 303 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 PBDC1Q9BVG4 233 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 MAP6D1Q9H9H5 199 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 GPN1Q9HCN4 374 aaPredicted RBP9.94□□□□□ -0.82
CLK3-213ENST00000563842 HUWE1Q7Z6Z7 4374 aaKnown RBP9.94□□□□□ -0.82
CLK3-213ENST00000563842 AGRNO00468 2067 aa9.94□□□□□ -0.82
CLK3-213ENST00000563842 IGKV1D-37A0A075B6S9 117 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 FAM25EA8MYX2 175 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 PRSS46E5RG02 174 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 L7N2F9 121 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 BUB3O43684 328 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 DEFA1P59665 94 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 DEFA3P59666 94 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 VAMP2P63027 116 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 ZNF90Q03938 601 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 Q6ZWC4 215 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 APRG1Q8IVJ8 170 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 OR10P1Q8NGE3 313 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 GLMPQ8WWB7 406 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 FBXL17Q9UF56 701 aa9.93□□□□□ -0.82
CLK3-213ENST00000563842 FNDC10F2Z333 226 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 K7EQG2 157 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 DEFB131AP59861 70 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 LYZP61626 148 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 TMEM14EPQ6UXP3 125 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 GSG1LQ6UXU4 331 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 SIGLEC15Q6ZMC9 328 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 ACOT7LQ6ZUV0 252 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 BPIFCQ8NFQ6 507 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 PPP1R14BQ96C90 147 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 C2orf50Q96LR7 162 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 EDA2RQ9HAV5 297 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 SEPSECSQ9HD40 501 aaKnown RBP9.92□□□□□ -0.82
CLK3-213ENST00000563842 TP53TG1Q9Y2A0 90 aa9.92□□□□□ -0.82
CLK3-213ENST00000563842 IGKV1OR2-108A0A075B7D4 117 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 SMCO3A2RU48 225 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 CCSO14618 274 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 PRAF2O60831 178 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 MBPP02686 304 aaPredicted RBP9.91□□□□□ -0.82
CLK3-213ENST00000563842 RPL35AP18077 110 aaKnown RBP9.91□□□□□ -0.82
CLK3-213ENST00000563842 PVALBP20472 110 aaPredicted RBP9.91□□□□□ -0.82
CLK3-213ENST00000563842 PAX9P55771 341 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 DLK1P80370 383 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 OR2F1Q13607 317 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 C1orf194Q5T5A4 169 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 NPVFQ9HCQ7 196 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 RETNQ9HD89 108 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 MGAT4CQ9UBM8 478 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 SLC45A2Q9UMX9 530 aa9.91□□□□□ -0.82
CLK3-213ENST00000563842 RCL1Q9Y2P8 373 aaKnown RBP9.91□□□□□ -0.82
CLK3-213ENST00000563842 PMS2P5A8MQ11 134 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 METTL15P1P0C7V9 234 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 LYL1P12980 280 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 SNRPD3P62318 126 aaKnown RBP9.9□□□□□ -0.82
CLK3-213ENST00000563842 SELENOTP62341 195 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 S100A7AQ86SG5 101 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 STHQ8IWL8 128 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 DCANP1Q8TF63 244 aa9.9□□□□□ -0.82
CLK3-213ENST00000563842 GGACTQ9BVM4 153 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms